Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq738 150 2e-31 seq412 84.2 2e-11 >seq738 Length=407637 Score = 150 bits (166), Expect = 2e-31 Identities = 535/827 (65%), Gaps = 17/827 (2%) Strand=Plus/Plus Query 16724 GATATATTCTCCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCA 16781 || ||||| ||||||||||| ||||||||| | | || |||| ||| || || || | Sbjct 114351 GAAATATTATCCATGAAATCCAAAGGATTATGAACATTGTAAATCTTT--GAATATCCAA 114408 Query 16782 GTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCA 16841 |||| | ||||||||| || |||||| |||||| | ||| || ||| |||| Sbjct 114409 GTTCAATTAATAATCTATCAGCAACAAATCTTATATAATTAATCATAGATGAGCAATTCA 114468 Query 16842 TTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTT 16901 |||| || || || | | || |||| |||| | || ||| |||| |||| Sbjct 114469 AACCTAAAATTTCAACGGGTAATGACTCTGTCAGAAATTCTCCTTCAATATCAACTGCTT 114528 Query 16902 CCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTT---AAACA 16958 ||| || || | ||| | || || | ||||||| | || ||| | | | Sbjct 114529 CCTGTATTATTGAATAAACCTTTGAATCAGATAATTTATGTTTTAAATATTTCCTATATA 114588 Query 16959 TCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATG 17018 |||||||| || || |||||||| |||| ||||| || |||||||| ||| || | Sbjct 114589 AGAGACATGCAAATTCACAATGTAAGGCCTCATCTCTACTTATAAGTTCATTACTGAAAG 114648 Query 17019 TCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAA 17078 | || || ||||| | || || || ||||||||||| || || || |||||| | Sbjct 114649 TTAAACCTGGCATAATATTACGCTTTTTCAACCAAAATATTGCTGCAAAACTCCCAGAGA 114708 Query 17079 AGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGT 17138 |||| || || || || ||||||||| | ||||| || ||| | | | | || | Sbjct 114709 AGAAAATCCCTTCAACCACTGCAAACGCTACCAATCGCTCTGCGAAACTTGAATTTTGAT 114768 Query 17139 TACGAATCCATTTCTGCACCCA-CTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATG 17197 | || |||| | |||| | |||||| | |||| || || || ||||| Sbjct 114769 CATATATATATTTATTTGCCCATATTCCCTTTTTTC-TTATTGAAGGGATGGTCTCTATT 114827 Query 17198 GCCTTAAATA-ATTTCTCTTTTTCCTG-TAGGTCGATTATAT--ACGTATCGATGAGTAG 17253 || ||||| | || |||| ||| | || |||| ||| | || || | | || Sbjct 114828 GCGTTAAAAAGATGATTCTT----CTGATCTGTAGATTCTATGAAAGTTTCTAATAATAA 114883 Query 17254 GCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGC 17313 ||| ||||| || || ||||| || ||||| | || ||||| | ||| || ||| || Sbjct 114884 GCTATACATCTCTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGC 114943 Query 17314 TTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTC 17373 ||| ||||| ||||| ||||| ||| | ||| || || || || Sbjct 114944 TTCAATGATTTGTACTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATTGTATC 115003 Query 17374 GCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAAC 17433 | || ||||| || | ||||| || |||| |||||| || | ||| || Sbjct 115004 TGATGAAGCAAAAAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTT 115063 Query 17434 GCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCAC 17493 ||| | | | ||| || |||| ||| || ||||| | |||||||||| || || Sbjct 115064 CTTCCAATGAGTAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAAAAAGATGCTAC 115123 Query 17494 TGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATA 17540 | | ||||||| | | ||| ||||| |||| ||| || |||| Sbjct 115124 AGATTGTTTATACTTGTACCATATATCGGGGTATAATATTGGAAATA 115170 >seq412 Length=567167 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || || ||||| | |||||||||||| ||||| | || |||||||| |||||| Sbjct 174945 ATGTAGGTGTCAATGAGCAAGCTGTACATTTCCGAGTGGACATTTTCCATGGCGATCTGA 175004 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| || ||||| | || || || ||| ||| || || | || Sbjct 175005 AAGCCGTAGAAGCAGCGCGCTTCGGTGATCTGCACCTCCTGACTGAACCGCTCGACCAGG 175064 Query 17354 TTTTCGTTCACGATGC 17369 || ||||| |||| || Sbjct 175065 TTCTCGTTGACGACGC 175080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517244401399440