Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq738 150 2e-31
seq412 84.2 2e-11
>seq738
Length=407637
Score = 150 bits (166), Expect = 2e-31
Identities = 535/827 (65%), Gaps = 17/827 (2%)
Strand=Plus/Plus
Query 16724 GATATATTCTCCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCA 16781
|| ||||| ||||||||||| ||||||||| | | || |||| ||| || || || |
Sbjct 114351 GAAATATTATCCATGAAATCCAAAGGATTATGAACATTGTAAATCTTT--GAATATCCAA 114408
Query 16782 GTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCA 16841
|||| | ||||||||| || |||||| |||||| | ||| || ||| ||||
Sbjct 114409 GTTCAATTAATAATCTATCAGCAACAAATCTTATATAATTAATCATAGATGAGCAATTCA 114468
Query 16842 TTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTT 16901
|||| || || || | | || |||| |||| | || ||| |||| ||||
Sbjct 114469 AACCTAAAATTTCAACGGGTAATGACTCTGTCAGAAATTCTCCTTCAATATCAACTGCTT 114528
Query 16902 CCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTT---AAACA 16958
||| || || | ||| | || || | ||||||| | || ||| | | |
Sbjct 114529 CCTGTATTATTGAATAAACCTTTGAATCAGATAATTTATGTTTTAAATATTTCCTATATA 114588
Query 16959 TCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATG 17018
|||||||| || || |||||||| |||| ||||| || |||||||| ||| || |
Sbjct 114589 AGAGACATGCAAATTCACAATGTAAGGCCTCATCTCTACTTATAAGTTCATTACTGAAAG 114648
Query 17019 TCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAA 17078
| || || ||||| | || || || ||||||||||| || || || |||||| |
Sbjct 114649 TTAAACCTGGCATAATATTACGCTTTTTCAACCAAAATATTGCTGCAAAACTCCCAGAGA 114708
Query 17079 AGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGT 17138
|||| || || || || ||||||||| | ||||| || ||| | | | | || |
Sbjct 114709 AGAAAATCCCTTCAACCACTGCAAACGCTACCAATCGCTCTGCGAAACTTGAATTTTGAT 114768
Query 17139 TACGAATCCATTTCTGCACCCA-CTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATG 17197
| || |||| | |||| | |||||| | |||| || || || |||||
Sbjct 114769 CATATATATATTTATTTGCCCATATTCCCTTTTTTC-TTATTGAAGGGATGGTCTCTATT 114827
Query 17198 GCCTTAAATA-ATTTCTCTTTTTCCTG-TAGGTCGATTATAT--ACGTATCGATGAGTAG 17253
|| ||||| | || |||| ||| | || |||| ||| | || || | | ||
Sbjct 114828 GCGTTAAAAAGATGATTCTT----CTGATCTGTAGATTCTATGAAAGTTTCTAATAATAA 114883
Query 17254 GCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGC 17313
||| ||||| || || ||||| || ||||| | || ||||| | ||| || ||| ||
Sbjct 114884 GCTATACATCTCTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGC 114943
Query 17314 TTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTC 17373
||| ||||| ||||| ||||| ||| | ||| || || || ||
Sbjct 114944 TTCAATGATTTGTACTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATTGTATC 115003
Query 17374 GCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAAC 17433
| || ||||| || | ||||| || |||| |||||| || | ||| ||
Sbjct 115004 TGATGAAGCAAAAAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTT 115063
Query 17434 GCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCAC 17493
||| | | | ||| || |||| ||| || ||||| | |||||||||| || ||
Sbjct 115064 CTTCCAATGAGTAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAAAAAGATGCTAC 115123
Query 17494 TGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATA 17540
| | ||||||| | | ||| ||||| |||| ||| || ||||
Sbjct 115124 AGATTGTTTATACTTGTACCATATATCGGGGTATAATATTGGAAATA 115170
>seq412
Length=567167
Score = 84.2 bits (92), Expect = 2e-11
Identities = 100/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || || || ||||| | |||||||||||| ||||| | || |||||||| ||||||
Sbjct 174945 ATGTAGGTGTCAATGAGCAAGCTGTACATTTCCGAGTGGACATTTTCCATGGCGATCTGA 175004
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||| ||||| || ||||| | || || || ||| ||| || || | ||
Sbjct 175005 AAGCCGTAGAAGCAGCGCGCTTCGGTGATCTGCACCTCCTGACTGAACCGCTCGACCAGG 175064
Query 17354 TTTTCGTTCACGATGC 17369
|| ||||| |||| ||
Sbjct 175065 TTCTCGTTGACGACGC 175080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517244401399440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |