Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq738 246 4e-60 seq293 93.3 5e-14 seq412 84.2 3e-11 >seq738 Length=407637 Score = 246 bits (272), Expect = 4e-60 Identities = 586/877 (67%), Gaps = 14/877 (2%) Strand=Plus/Plus Query 23843 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATT 23902 |||||| ||||||| ||| | ||||| || ||||| || ||| ||||| ||||| Sbjct 114299 TTTTTGATATTCACTCACCCTCTTTTCAAAGAAATTTGTCTTATTAATCAATGAAATATT 114358 Query 23903 TTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAA-ATCCCAATTCAGAAA 23961 ||||||||||| | ||||| |||||| || | ||||| || |||| | |||| | Sbjct 114359 ATCCATGAAATCCAAAGGATTATGAACATTGTA-AATCTTTGAATATCCAAGTTCAATTA 114417 Query 23962 TCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAA 24021 |||||||| || ||||| ||||| | |||| | ||||||| |||| || Sbjct 114418 ATAATCTATCAGCAACAAATCTTATATAATTAATCATAGATGAGCAATTCAAACCTAAAA 114477 Query 24022 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 24081 || ||| || | | | | || ||||||||| ||||||| || || || ||| | Sbjct 114478 TTTCAACGGGTAATGACTCTGTCAGAAATTCTCCTTCAATATCAACTGCTTCCTGTATTA 114537 Query 24082 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTT---TAAACATCAAACATG 24138 | || || || ||| | || ||||| || || | | | ||||| Sbjct 114538 TTGAATAAACCTTTGAATCAGATAATTTATGTTTTAAATATTTCCTATATAAGAGACATG 114597 Query 24139 CGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 24198 | || || || |||| |||| |||||||| || | ||| || || || | || | Sbjct 114598 CAAATTCACAATGTAAGGCCTCATCTCTACTTATAAGTTCATTACTGAAAGTTAAACCTG 114657 Query 24199 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTC 24258 |||| | ||||||||| | ||||||||| | ||||| ||||| |||||||| | Sbjct 114658 GCATAATATTACGCTTTTTCAACCAAAATATTGCTGCAAAACTCCCAGAGAAGAAAATCC 114717 Query 24259 CTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCT---GTCATGTATCC 24315 |||| || | ||||| || | | || ||| | ||| | | |||| ||| Sbjct 114718 CTTCAACCACTGCAAACGCTACCAATCGCTCTGCGAAACTTGAATTTTGATCATATATAT 114777 Query 24316 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGA 24375 | || | ||||| |||| ||| ||| |||| || |||||||| || ||||| | Sbjct 114778 ATTTATTTGCCCATATTCCCTTTTTTCTTATTGAAGGGATGGTCTCTATTGCGTTAAAAA 114837 Query 24376 GATAGtttttttCATTACTATCTTTAACATATGTATC-AATCAAAAGACTATACATTTCC 24434 ||| || || | || || || | | || || ||| | ||| |||||||| || Sbjct 114838 GATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAATAATAAG-CTATACATCTCT 114896 Query 24435 GAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGT 24494 ||||| || ||||| || | | |||||| | ||||||| ||||||| || | || ||| Sbjct 114897 GAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGCTTCAATGATTTGT 114956 Query 24495 ACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG--GCTGCAA 24552 |||||| | |||| ||| ||||| ||| || ||| || ||| | |||| Sbjct 114957 ACTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATT--GTATCTGATGAAGCAA 115014 Query 24553 AAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCAT 24612 |||| || | | |||| |||||||| |||||| |||| ||| || || ||||||| | Sbjct 115015 AAAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTTCTTCCAATGAG 115074 Query 24613 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 24672 | ||||| ||||||| ||| || ||||| |||||||| ||||| | | | ||||| Sbjct 115075 TAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAAAAAGATGCTACAGATTGTTTAT 115134 Query 24673 ACATATTCCAGATGTCATGATATTGAATTGGAAAAAT 24709 || | | ||| || || | ||| |||||||| || Sbjct 115135 ACTTGTACCATATATCGGGGTATAATATTGGAAATAT 115171 Score = 145 bits (160), Expect = 9e-30 Identities = 797/1259 (63%), Gaps = 72/1259 (6%) Strand=Plus/Plus Query 53399 TATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTA---ATGCACCGTAATAAATG 53455 ||| |||| || || ||| |||||||| || || || | ||||| ||||| | Sbjct 383409 TATTGTCCATCATTTCTAGCAAGTTCACAGCTTGCTTCAAGAGATGCA---TAATAGAGA 383465 Query 53456 GTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAG 53515 ||||| || || |||||||| | | | ||| || || |||| ||||| Sbjct 383466 GTTTCAAATATTTTCTTATTCAATTGGATAGATTCTTCACTGCCATATGGTATTTTTAAA 383525 Query 53516 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 53575 | || || || ||||| || |||| || || || |||||||||| | | ||||| Sbjct 383526 ATCATGAATAGATCAGCTAAACCCTGAATTCCGATCCCAATAGGTCTATTTTTTTTATTT 383585 Query 53576 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTG 53635 || | ||| | |||| || | ||||||||| ||||| || | |||||| || ||| Sbjct 383586 GAAAATTCTGTAGCTGGGATTGTATAATAATTCATATCGATTAATTTATTTAGATTTTGT 383645 Query 53636 ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCATCTAT------T 53689 || ||||| || | ||| ||| |||||||||| ||| | | Sbjct 383646 GTAACAACTTTTGTAACCTGTCTCAATTTATAAAAATCAAATACATTATCATTGGGAACT 383705 Query 53690 ACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCAT--TAGCATCCG 53747 | ||| | || | ||| || || || |||||||| || || | |||| | || | Sbjct 383706 ATAAATTTATTAACTGCTATGGAAGCAAGATTACAGACTGCAATTTCATCTTTTGAT--G 383763 Query 53748 CATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGAT 53807 | |||||| || ||||| || | ||||| || || |||||||| ||||| ||| | Sbjct 383764 AAAATTGTACAATTTCAGTACATAAGTTACTGCATTTTATGGTTCCCAAATTAATTTGGT 383823 Query 53808 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTA--CCAGTTTCAATCTG 53865 || |||| | ||| ||||||| | | || || | ||| ||||||||||| || Sbjct 383824 TAGACTTTCTATTAATACTATCCTTAAATAACAT--ATAGGGTAATCCAGTTTCAATTTG 383881 Query 53866 GGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGT-------ATC 53918 || || || |||| || || | || | || |||||| ||| Sbjct 383882 ACTATCAATTAT---TTTCATGA----ACAATTCTCTTGCATCTATTTGTTCCAAATATC 383934 Query 53919 TCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCA 53978 |||||||| ||| ||| || ||| | | ||||||||| | |||||||| ||| Sbjct 383935 TCTTTTCTTGTTCATATTGTCCATATAGTAATTCAAACTCATTACCCCAAAC---GTCTG 383991 Query 53979 ATCCA---GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 54035 || | ||||||| || |||||||| || ||| | | | || | ||| | Sbjct 383992 ATAGATTTGGACATTGATTTGGACACATTAAACTCCAAATTTCATTATTTTCCACCCTAG 384051 Query 54036 TCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCG 54094 |||||| ||||||| | ||||||| | ||| |||| |||||| | |||| |||| || Sbjct 384052 ACATAAATAGATCAGACAACCAAAGA-CCATAGAATAAATCTCTTGCTCTAAGTTCATCA 384110 Query 54095 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 54154 || || |||| ||||| | || | || || ||||||| |||||| | || || Sbjct 384111 TTGCCAATATTTTTTTTCAAATTCAAAAATTTCAAAATATCAATATGCCATGACTCTAAA 384170 Query 54155 TATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 54214 || || | || | || || || || ||||||||||| | |||| | | | || Sbjct 384171 TAGATTGCAATGGCCCCTGGTCG---CTTCCCTCCCTGATCAACCAATCTCACAGAGCTA 384227 Query 54215 TTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGA---TA 54271 ||| | | | | | | ||| | |||||| || ||| || ||| | | Sbjct 384228 TTAAATAAACGAATTGTAGAAATTAGACCATTTGA--AACC------CCAGGATAAATTT 384279 Query 54272 TAGCTTCCACTG--GCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAG 54329 || | | ||| || ||| | | | || ||| || || || ||| |||| Sbjct 384280 TATCATTATCTGTTGCTTTGATACAATGTAAAGCTAAACCAATTCCACCCATCATATTAG 384339 Query 54330 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA---TCCATCA 54386 | ||||| || || ||| | |||||||| || || || |||| |||| | Sbjct 384340 ATATTAAAGCACAATTTTTGAGTGTATCATAAATATTGTCAATTGAATCACTTTCCA--A 384397 Query 54387 TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAG 54446 ||||| || |||||| || | || ||| || | ||| | ||||| | || |||| Sbjct 384398 AGTTAA-TAAAAAACAACTTGCCAATTGCTGCTGTGGAGTACATGCATTTATTAGTGTAG 384456 Query 54447 GAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTA 54506 ||| || || || | |||||| || || |||| || || || | | ||| | Sbjct 384457 GAGTTGCATGAGTGTAATATTTTTGTGATAGAAGATCATAGGTTTCTCTTATTTTGTCAA 384516 Query 54507 TA----TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 54562 || | ||||| || | ||| | || | ||| ||||| || |||||||||||| Sbjct 384517 TATTGTTACCATT----TATACTTACCGATACTCTCATAAACATATGTTGAGGTCTTTCA 384572 Query 54563 ACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 54621 | || || | ||||||| | ||| ||| |||| || |||||| | |||||||| Sbjct 384573 ATAATAACATTATCAATTTTCATTAGGTATGATGTTTCTAATGTTTTATATCCAAAATA 384631 >seq293 Length=664131 Score = 93.3 bits (102), Expect = 5e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827 ||||||| ||||| || ||||||||||||| || || || || || | |||||| || | Sbjct 211508 CACTAAACAGTTTCTTAGTTTCTTTGTGTAAGTTGGAGACTGCAATGCGAGCGGCCAGGA 211567 Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887 | |||||||| ||||| | || || |||||| || ||||||| | || | | |||| Sbjct 211568 TTGCATAATCGGGATGACGAGTGGTTAGAGTGGCAGCAGTTTCGGCCGCCAAATTATCCA 211627 Query 54888 ATTCTACCGTTGTTACTCC 54906 ||| || ||||| || || Sbjct 211628 GTTCAACAGTTGTCACACC 211646 >seq412 Length=567167 Score = 84.2 bits (92), Expect = 3e-11 Identities = 128/182 (70%), Gaps = 9/182 (5%) Strand=Plus/Plus Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || ||||| || ||||| || |||||||| |||||||| |||||||||||||| || Sbjct 173441 AAGGTGAGACCAGGCATGAGACCACGCTTCTTAAGCCAGAATATGGACGCAAAGCTGCCC 173500 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGC---- 24301 || ||||| || || || || || || || || | || || || || | ||| Sbjct 173501 GAGAAGAAGATGCCCTCAACGGCGGCGAACGCCACAACTCGCTCGCCGAACGTGGCCGTT 173560 Query 24302 --GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTC 24359 |||| | ||||||| ||||| || |||||| | || ||||| ||||||||| Sbjct 173561 TGGCTGGC---GATCCACTGCAACGCCCAGTCCGCCTTCCTCTTAACACACGGCATTGTC 173617 Query 24360 TC 24361 || Sbjct 173618 TC 173619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593376068871840