Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq3617 104 3e-17 seq986 100 3e-16 >seq3617 Length=57851 Score = 104 bits (114), Expect = 3e-17 Identities = 196/283 (69%), Gaps = 4/283 (1%) Strand=Plus/Minus Query 145813 CCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACG 145872 || || |||||||| |||| | |||||||| ||| ||| ||||| ||| ||||| Sbjct 12126 CCTAGGCCCATGTCGGCCGACCTCTGGTACATCTGACAGCTGAGCTGGTTGCCGGCCACA 12067 Query 145873 TAGAACTGGCACAGGAG-GTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG-GT 145930 |||||||| ||| || ||| ||||||||||| ||||| || |||| ||| || || Sbjct 12066 TAGAACTG-CACGAGACAGTGACAGGGCGGCAGCGCCATCTTGGTTAGGT-CGCTGGCGT 12009 Query 145931 TCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGT 145990 |||| ||| | || || | |||| || || || | |||||| || | || Sbjct 12008 TCCATGCGCACATGATGATGCGCCTGTCGTCCGGATTGGTGGTGATCTTGGTGATGACGT 11949 Query 145991 CCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCC 146050 | | |||||||| || |||||| || || || || |||| |||| |||| | Sbjct 11948 CACGCAGCTGGTCGACACCCTGCGACCTATAGTCGGTGAACATGTCCTTGTACTCGGCTC 11889 Query 146051 CGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC 146093 | ||||| | |||||| || ||||| || || || ||||| || Sbjct 11888 CAAAGTGACGCCACTGAAAGCCGTAAACTGGGCCAAGGTCACC 11846 >seq986 Length=341358 Score = 100 bits (110), Expect = 3e-16 Identities = 195/283 (69%), Gaps = 4/283 (1%) Strand=Plus/Minus Query 145813 CCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACG 145872 || || |||||||| |||| | |||||||| ||| ||| ||||| ||| ||||| Sbjct 236062 CCTAGGCCCATGTCGGCCGACCTCTGGTACATCTGACAGCTGAGCTGGTTGCCGGCCACA 236003 Query 145873 TAGAACTGGCACAGGAG-GTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG-GT 145930 |||||||| ||| || ||| ||||||||||| ||||| || |||| ||| || || Sbjct 236002 TAGAACTG-CACGAGACAGTGACAGGGCGGCAGCGCCATCTTGGTTAGGT-CGCTGGCGT 235945 Query 145931 TCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGT 145990 |||| ||| | || || | |||| || || || | |||||| || | || Sbjct 235944 TCCATGCGCACATGATGATGCGCCTGTCGTCCGGATTGGTGGTGATCTTGGTGATGACGT 235885 Query 145991 CCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCC 146050 | | | |||||| || |||||| || || || || |||| |||| |||| | Sbjct 235884 CACGCAACTGGTCGACACCCTGCGACCTATAGTCGGTGAACATGTCCTTGTACTCGGCTC 235825 Query 146051 CGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC 146093 | ||||| | |||||| || ||||| || || || ||||| || Sbjct 235824 CAAAGTGACGCCACTGAAAGCCGTAAACTGGGCCAAGGTCACC 235782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589733390054320