Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq3617 104 3e-17
seq986 100 3e-16
>seq3617
Length=57851
Score = 104 bits (114), Expect = 3e-17
Identities = 196/283 (69%), Gaps = 4/283 (1%)
Strand=Plus/Minus
Query 145813 CCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACG 145872
|| || |||||||| |||| | |||||||| ||| ||| ||||| ||| |||||
Sbjct 12126 CCTAGGCCCATGTCGGCCGACCTCTGGTACATCTGACAGCTGAGCTGGTTGCCGGCCACA 12067
Query 145873 TAGAACTGGCACAGGAG-GTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG-GT 145930
|||||||| ||| || ||| ||||||||||| ||||| || |||| ||| || ||
Sbjct 12066 TAGAACTG-CACGAGACAGTGACAGGGCGGCAGCGCCATCTTGGTTAGGT-CGCTGGCGT 12009
Query 145931 TCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGT 145990
|||| ||| | || || | |||| || || || | |||||| || | ||
Sbjct 12008 TCCATGCGCACATGATGATGCGCCTGTCGTCCGGATTGGTGGTGATCTTGGTGATGACGT 11949
Query 145991 CCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCC 146050
| | |||||||| || |||||| || || || || |||| |||| |||| |
Sbjct 11948 CACGCAGCTGGTCGACACCCTGCGACCTATAGTCGGTGAACATGTCCTTGTACTCGGCTC 11889
Query 146051 CGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC 146093
| ||||| | |||||| || ||||| || || || ||||| ||
Sbjct 11888 CAAAGTGACGCCACTGAAAGCCGTAAACTGGGCCAAGGTCACC 11846
>seq986
Length=341358
Score = 100 bits (110), Expect = 3e-16
Identities = 195/283 (69%), Gaps = 4/283 (1%)
Strand=Plus/Minus
Query 145813 CCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACG 145872
|| || |||||||| |||| | |||||||| ||| ||| ||||| ||| |||||
Sbjct 236062 CCTAGGCCCATGTCGGCCGACCTCTGGTACATCTGACAGCTGAGCTGGTTGCCGGCCACA 236003
Query 145873 TAGAACTGGCACAGGAG-GTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG-GT 145930
|||||||| ||| || ||| ||||||||||| ||||| || |||| ||| || ||
Sbjct 236002 TAGAACTG-CACGAGACAGTGACAGGGCGGCAGCGCCATCTTGGTTAGGT-CGCTGGCGT 235945
Query 145931 TCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGT 145990
|||| ||| | || || | |||| || || || | |||||| || | ||
Sbjct 235944 TCCATGCGCACATGATGATGCGCCTGTCGTCCGGATTGGTGGTGATCTTGGTGATGACGT 235885
Query 145991 CCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCC 146050
| | | |||||| || |||||| || || || || |||| |||| |||| |
Sbjct 235884 CACGCAACTGGTCGACACCCTGCGACCTATAGTCGGTGAACATGTCCTTGTACTCGGCTC 235825
Query 146051 CGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC 146093
| ||||| | |||||| || ||||| || || || ||||| ||
Sbjct 235824 CAAAGTGACGCCACTGAAAGCCGTAAACTGGGCCAAGGTCACC 235782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589733390054320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |