Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq738 150 3e-31
seq1095 102 1e-16
seq347 89.7 8e-13
seq944 84.2 3e-11
>seq738
Length=407637
Score = 150 bits (166), Expect = 3e-31
Identities = 176/233 (76%), Gaps = 10/233 (4%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| |||||| | | ||||| || || | ||| || || || || ||| || ||| |
Sbjct 219475 ATGCAGATATTTGTTAGAACACTTACTGGGAGAACAATCACAATTGATATTAAATCAACT 219534
Query 124599 GATACAATT--TCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656
|||||||| |||||| |||| || | || |||||||||||||||| ||| ||||
Sbjct 219535 GATACAATAGCTCTAAT--AAAAGAGTATATAAAAGATAAAGAAGGTATTCCAATAGATC 219592
Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAA---GATT 124713
||||| | || || ||| ||||||| |||||||| ||| || || ||| | | ||||
Sbjct 219593 AACAACGTCTCATATTTTCAGGAAAGCAATTAGAAGAT--TC-AAGATTCGTAATGGATT 219649
Query 124714 ATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766
||||||| ||||| || ||||| |||||| |||||||| | | || ||||||
Sbjct 219650 ATAATATACAAAAGGATTCAACATTGCATCTGGTTTTAAGGCTTCGTGGTGGT 219702
>seq1095
Length=312686
Score = 102 bits (112), Expect = 1e-16
Identities = 121/163 (74%), Gaps = 1/163 (1%)
Strand=Plus/Plus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
|| ||||||||||| ||||| || |||||||| || || | || ||||| || || |||
Sbjct 81445 AAGATTCAAGATAAGGAAGGAATCCCACCTGACCAGCAGCGCCTCATTTTCGCTGGTAAA 81504
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742
|| | |||||| | | ||||| ||| || |||||||| |||||||| ||| | |||
Sbjct 81505 CAGCTGGAGGATGGCAGGACATTGTCAGACTACAATATTCAGAAAGAATCCACTCTCCAT 81564
Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTCATAAAAA 124784
| || || ||| | || ||||| || | | |||| ||||||
Sbjct 81565 CTTGTGTTGCGTCTCCGTGGTGGCATGCAGATATTCGTAAAAA 81607
Score = 102 bits (112), Expect = 1e-16
Identities = 121/163 (74%), Gaps = 1/163 (1%)
Strand=Plus/Plus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
|| ||||||||||| ||||| || |||||||| || || | || ||||| || || |||
Sbjct 88266 AAGATTCAAGATAAGGAAGGAATCCCACCTGACCAGCAGCGCCTCATTTTCGCTGGTAAA 88325
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742
|| | |||||| | | ||||| ||| || |||||||| |||||||| ||| | |||
Sbjct 88326 CAGCTGGAGGATGGCAGGACATTGTCAGACTACAATATTCAGAAAGAATCCACTCTCCAT 88385
Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTCATAAAAA 124784
| || || ||| | || ||||| || | | |||| ||||||
Sbjct 88386 CTTGTGTTGCGTCTCCGTGGTGGCATGCAGATATTCGTAAAAA 88428
Score = 84.2 bits (92), Expect = 3e-11
Identities = 145/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
||||||||| ||| ||||||| || || ||||| || || || | || | || |
Sbjct 90461 AATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCTTGGAAGTGGAGCCCTC 90520
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||||| ||| || | || || || ||||| || || || || ||||| || ||
Sbjct 90521 CGATACCATTGAAAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATTCCACCCGACCA 90580
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|| || ||||| || || ||||| ||| | |||||| || |||| | || || ||
Sbjct 90581 GCAGAGACTTATCTTCGCTGGAAAGCAACTGGAGGATGGTAGAACCCTGTCTGACTACAA 90640
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTT 124748
|| ||||||||||| || | || ||||||
Sbjct 90641 CATCCAAAAAGAATCTACACTCCACTTGGTT 90671
>seq347
Length=619498
Score = 89.7 bits (98), Expect = 8e-13
Identities = 162/239 (68%), Gaps = 16/239 (7%)
Strand=Plus/Plus
Query 59931 AAAGCATTTGATAATGTTGATAGAGAAATTTTATGGAATATAATGCATTTACATGGTTAT 59990
|||||||||||||||||||||||||| | | ||||| || ||| | |||| ||
Sbjct 54903 AAAGCATTTGATAATGTTGATAGAGAGCTACTCTGGAACATCATGATGACAAATGGATAC 54962
Query 59991 CCACCACATTTAATTAATGCtattaaaagtttatatgaaaatact------agaattatt 60044
|| ||||||||| | | || |||| |||||| | |||||| |||| |||
Sbjct 54963 CCCAAACATTTAATCAGTAGCATAAAAACATTATATCACAATACTTCCATAAGAAGCATT 55022
Query 60045 gtaaaa----------tcaaaagtaataaaaataaataaaggaattaaaCAAGGATGTGC 60094
| |||| || | || |||| | |||||||||| | ||||| ||||| |
Sbjct 55023 GGAAAATGGGGAATTGTCCAGAGAAATACTGACAAATAAAGGAGTAAAACAGGGATGCCC 55082
Query 60095 TGTTTCACTTTCATTATTTAATATTTATATCGATCATATTATGAATGAATGGAAACAAC 60153
|||||| | | | || ||||||||| | ||| | ||||| ||| ||| | ||||
Sbjct 55083 AATTTCACCTGCCCTCTTCAATATTTATGTTGATGAGCTTATGCATGTGTGGCAGCAAC 55141
>seq944
Length=351154
Score = 84.2 bits (92), Expect = 3e-11
Identities = 175/258 (68%), Gaps = 17/258 (7%)
Strand=Plus/Plus
Query 59913 GCATTTATTGATTTTAAAAAAGCATTTGATAATGTTGATAGAGAAATTTTATGGAATATA 59972
|| ||| | || || | |||||||||||||||||||||||||| | | ||||| ||
Sbjct 194077 GCCTTTGTAGACTTGGAGAAAGCATTTGATAATGTTGATAGAGAGCTACTCTGGAACATC 194136
Query 59973 ATGCATTTACATGGTTATCCACCACATTTAATTAATGCtattaaaagtttatatgaaaat 60032
||| | |||| || || ||||||||| | | || |||| |||||| | |||
Sbjct 194137 ATGATGACAAATGGATACCCCAAACATTTAATCAGTAACATAAAAAAATTATATCACAAT 194196
Query 60033 act------agaat--tattgtaaaat---caaaagt-aataaaaat-----aaataaag 60075
||| ||||| |||| ||||| || || | | |||| ||||||||
Sbjct 194197 ACTTCCATAAGAATAACATTGGAAAATGGGGAATTGTCCAGAGAAATACTGAAAATAAAG 194256
Query 60076 gaattaaaCAAGGATGTGCTGTTTCACTTTCATTATTTAATATTTATATCGATCATATTA 60135
|| | ||||| ||||| | |||||| | | | || ||||||||| | ||| | |||
Sbjct 194257 GAGTAAAACAGGGATGCCCAATTTCACCTGCCCTCTTCAATATTTATGTTGATGAGCTTA 194316
Query 60136 TGAATGAATGGAAACAAC 60153
|| ||| ||| | ||||
Sbjct 194317 TGCATGTGTGGCAGCAAC 194334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755016343494400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |