Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq71 111 3e-19
>seq71
Length=1040180
Score = 111 bits (122), Expect = 3e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 189417 AACAACTCGAAAAAGCGGAAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGG 189476
|| |||| ||||| || ||||||||||| | | ||||| | || || ||||| ||
Sbjct 300717 AAGAACTGGAAAACGCAAAAACTCATGATGATTTGTGGAATTCAGCAGAAGTGCAGTTGT 300776
Query 189477 TGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAAT 189536
||| ||| |||||||| ||| |||| | |||||||| ||||| |||||||| |||||||
Sbjct 300777 TGAAAGAGGGAAAAATACATGGTTTCCTGCGAATGTACTGGGCAAAGAAGATTCTTGAAT 300836
Query 189537 GGACTAGAACACCTGAAGACGC-TTTGAGTTATAGTATCTATTTGAACAACAAGTACGAA 189595
|||| | | |||||||| || |||| ||| || ||| | || | || |||
Sbjct 300837 GGACGACTTCCCCTGAAGAAGCACTTGAAATAT-CCATTTATCTCAATGATAAATACAGT 300895
Query 189596 CTAGACGGCACGGATCCTAACGGATACGTAGGT 189628
| || |||| ||||| ||||| | ||| |||
Sbjct 300896 ATGGATGGCAGAGATCCCAACGGTTTCGTTGGT 300928
Score = 104 bits (114), Expect = 4e-17
Identities = 108/142 (76%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 189417 AACAACTCGAAAAAGCGGAAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGG 189476
|| |||| ||||| || ||||||||||| | | ||||| | || || ||||| ||
Sbjct 313633 AAGAACTGGAAAACGCAAAAACTCATGATGATTTGTGGAATTCAGCAGAAGTGCAGTTGT 313692
Query 189477 TGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAAT 189536
||| ||| |||||||| ||| |||| | |||||||| ||||| |||||||| ||||| |
Sbjct 313693 TGAAAGAGGGAAAAATACATGGTTTCCTGCGAATGTACTGGGCAAAGAAGATTCTTGAGT 313752
Query 189537 GGACTAGAACACCTGAAGACGC 189558
|||| | | |||||||| ||
Sbjct 313753 GGACGACCTCCCCTGAAGAAGC 313774
Score = 91.5 bits (100), Expect = 3e-13
Identities = 95/122 (78%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 189625 AGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAG-ACCGATAT 189683
||| || |||||||| || || ||| |||||||| || ||| |||||| | || |||
Sbjct 301830 AGGGTGCATGTGGTCGATATGTGGAATACACGATCAAGGCTGGGCAGAAAGGAACG-TAT 301888
Query 189684 TTGGAAAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAAATTTGATGTTGCTGTAT 189743
|||| ||||||||||| |||||||||| ||| ||| | |||||| ||||| || | ||
Sbjct 301889 TTGGTAAGATAAGATACATGAATTATGCTGGTTGTAAAAGGAAATTCGATGTAGCCGCAT 301948
Query 189744 TT 189745
||
Sbjct 301949 TT 301950
Score = 91.5 bits (100), Expect = 3e-13
Identities = 95/122 (78%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 189625 AGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAG-ACCGATAT 189683
||| || |||||||| || || ||| |||||||| || ||| |||||| | || |||
Sbjct 316250 AGGGTGCATGTGGTCGATATGTGGAATACACGATCAAGGCTGGGCAGAAAGGAACG-TAT 316308
Query 189684 TTGGAAAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAAATTTGATGTTGCTGTAT 189743
|||| ||||||||||| |||||||||| ||| ||| | |||||| ||||| || | ||
Sbjct 316309 TTGGTAAGATAAGATACATGAATTATGCTGGTTGTAAAAGGAAATTCGATGTAGCCGCAT 316368
Query 189744 TT 189745
||
Sbjct 316369 TT 316370
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 922659522542320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |