Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_002703.1 Length=38347 Score E Sequences producing significant alignments: (Bits) Value seq13052 378 2e-100 seq12081 111 4e-20 >seq13052 Length=1690 Score = 378 bits (418), Expect = 2e-100 Identities = 271/312 (87%), Gaps = 0/312 (0%) Strand=Plus/Minus Query 34481 AAGGGAGAATTCACGCTTATAATTCCTACTGAGATGACAGTATCAGGATTAATAAAATCA 34540 |||||||| || | | |||||||||| || ||||||| | | ||| | || || | Sbjct 1668 AAGGGAGAGTTTATTTTAGTAATTCCTACCGAAATGACAGAAACTGGAGTTATTGAAGCG 1609 Query 34541 AATTTAATACTTCTCAATGAAGATAAAGAGCAGGTTATCGTCAGTAAGAATCTTACATTT 34600 || ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| Sbjct 1608 AACTTAATACTTCTCAATGAAGATAAAGAGCAGGTTATCGTCAGCAAGAACCTTACGTTT 1549 Query 34601 ATATCAGATGATTCTACAGTTACAAGTTTAACTCAAGAAGTAAATAATAAGATTGATGAT 34660 ||||||||| ||||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct 1548 ATATCAGATAATTCTACGGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGAT 1489 Query 34661 TTTACAAAATTATTATTGGAAAATATGCCACAGGTTATGCGTAGTGAGTTGAATGATTTA 34720 |||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||| Sbjct 1488 TTTACAAAATTATTATTGGAAAATATGCCACAAGTAATGCGTAGTGAGTTGAATGACTTA 1429 Query 34721 CATGCTCAAACTGATTCAAACAAGAGCAATATTGAGCTTAAAGCAAATTTAGCTGATATG 34780 |||||||||||||| ||||||||||||||||||||||||||||| ||| | | || || Sbjct 1428 CATGCTCAAACTGAATCAAACAAGAGCAATATTGAGCTTAAAGCCAATCAAACAGACTTG 1369 Query 34781 ACGAGCTTACAA 34792 | | ||||||| Sbjct 1368 AACAACTTACAA 1357 Score = 176 bits (194), Expect = 1e-39 Identities = 106/112 (95%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 35210 TTAAGTACAAATCAAAATGTCGCAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAA 35269 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1299 TTAATCACAAATCAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAA 1240 Query 35270 GCCAAAAATGCAATGGCAAAGGCTACCAAAGCACAAGCGAACAGTTTACCAC 35321 ||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct 1239 GCCAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTAACAC 1188 >seq12081 Length=2162 Score = 111 bits (122), Expect = 4e-20 Identities = 88/103 (85%), Gaps = 6/103 (6%) Strand=Plus/Minus Query 36213 CATGGCAGAACATCGGTTCAGCAGTAATTGGTTCAACGACAATATATTATTGGCAACGCA 36272 ||||||| || |||||||| | ||||||||||||||| ||||||||||||||| |||||| Sbjct 1959 CATGGCAAAATATCGGTTCGGTAGTAATTGGTTCAACAACAATATATTATTGGAAACGCA 1900 Query 36273 CTGCATAAAAATATAAAAAATAGGAGAGTAAAATGAATCAAAT 36315 ||||||||||| |||||| |||| | ||||| ||| |||| Sbjct 1899 CTGCATAAAAA-ATAAAA---AGGAAAATAAAA--AATGAAAT 1863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122521023563964