Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_002747.1
Length=37667
Score E
Sequences producing significant alignments: (Bits) Value
seq13052 333 6e-87
seq12081 109 1e-19
>seq13052
Length=1690
Score = 333 bits (368), Expect = 6e-87
Identities = 261/312 (84%), Gaps = 0/312 (0%)
Strand=Plus/Minus
Query 31378 AAGGGAGAATTCACGCTTATAATTCCTACTGAGATGACAGTATCAGGATTAATAAAATCA 31437
|||||||| || | | |||||||||| || ||||||| | | ||| | || || |
Sbjct 1668 AAGGGAGAGTTTATTTTAGTAATTCCTACCGAAATGACAGAAACTGGAGTTATTGAAGCG 1609
Query 31438 AATTTAATACTTCTCAATGAAGATAAAGAGCAGGTTATTGTCAGTAAGAATTTAACATTT 31497
|| ||||||||||||||||||||||||||||||||||| ||||| ||||| | || |||
Sbjct 1608 AACTTAATACTTCTCAATGAAGATAAAGAGCAGGTTATCGTCAGCAAGAACCTTACGTTT 1549
Query 31498 ATATCAGATAATTCTACAGTTACAGATTTAGCTCAAGAAGTGAATAATAAGATTGATGAT 31557
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1548 ATATCAGATAATTCTACGGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGAT 1489
Query 31558 TTTACAAAATTATTATTAGGAAAAATGCCACAAGTTTTGCGTAGTGAGTTGAATGATTTA 31617
||||||||||||||||| | ||| ||||||||||| ||||||||||||||||||| |||
Sbjct 1488 TTTACAAAATTATTATTGGAAAATATGCCACAAGTAATGCGTAGTGAGTTGAATGACTTA 1429
Query 31618 CAGGCTAAAACTGATTCAAATGCGAGCAATATTGAACTAAAAGCAAATTTAGCTGATATG 31677
|| ||| ||||||| ||||| |||||||||||| || ||||| ||| | | || ||
Sbjct 1428 CATGCTCAAACTGAATCAAACAAGAGCAATATTGAGCTTAAAGCCAATCAAACAGACTTG 1369
Query 31678 ACAAGCTTACAA 31689
| | |||||||
Sbjct 1368 AACAACTTACAA 1357
Score = 190 bits (210), Expect = 5e-44
Identities = 108/110 (98%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 32040 AATCACAAATAAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAAGC 32099
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1297 AATCACAAATCAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAAGC 1238
Query 32100 CAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTACCAC 32149
|||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1237 CAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTAACAC 1188
>seq12081
Length=2162
Score = 109 bits (120), Expect = 1e-19
Identities = 87/102 (85%), Gaps = 6/102 (6%)
Strand=Plus/Minus
Query 33084 ATGGGAAAATATCGGTTCAGCAGTGATTGGTTCAACAACAATATATTATTGGCTACGCAC 33143
|||| ||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||
Sbjct 1958 ATGGCAAAATATCGGTTCGGTAGTAATTGGTTCAACAACAATATATTATTGGAAACGCAC 1899
Query 33144 TGCATAAAAACATAAAAAATAGGAGAGTAAAATGAATCAAAT 33185
|||||||||| |||||| |||| | ||||| ||| ||||
Sbjct 1898 TGCATAAAAA-ATAAAA---AGGAAAATAAAA--AATGAAAT 1863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 120346226622684
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |