Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_002747.1 Length=37667 Score E Sequences producing significant alignments: (Bits) Value seq13052 333 6e-87 seq12081 109 1e-19 >seq13052 Length=1690 Score = 333 bits (368), Expect = 6e-87 Identities = 261/312 (84%), Gaps = 0/312 (0%) Strand=Plus/Minus Query 31378 AAGGGAGAATTCACGCTTATAATTCCTACTGAGATGACAGTATCAGGATTAATAAAATCA 31437 |||||||| || | | |||||||||| || ||||||| | | ||| | || || | Sbjct 1668 AAGGGAGAGTTTATTTTAGTAATTCCTACCGAAATGACAGAAACTGGAGTTATTGAAGCG 1609 Query 31438 AATTTAATACTTCTCAATGAAGATAAAGAGCAGGTTATTGTCAGTAAGAATTTAACATTT 31497 || ||||||||||||||||||||||||||||||||||| ||||| ||||| | || ||| Sbjct 1608 AACTTAATACTTCTCAATGAAGATAAAGAGCAGGTTATCGTCAGCAAGAACCTTACGTTT 1549 Query 31498 ATATCAGATAATTCTACAGTTACAGATTTAGCTCAAGAAGTGAATAATAAGATTGATGAT 31557 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 1548 ATATCAGATAATTCTACGGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGAT 1489 Query 31558 TTTACAAAATTATTATTAGGAAAAATGCCACAAGTTTTGCGTAGTGAGTTGAATGATTTA 31617 ||||||||||||||||| | ||| ||||||||||| ||||||||||||||||||| ||| Sbjct 1488 TTTACAAAATTATTATTGGAAAATATGCCACAAGTAATGCGTAGTGAGTTGAATGACTTA 1429 Query 31618 CAGGCTAAAACTGATTCAAATGCGAGCAATATTGAACTAAAAGCAAATTTAGCTGATATG 31677 || ||| ||||||| ||||| |||||||||||| || ||||| ||| | | || || Sbjct 1428 CATGCTCAAACTGAATCAAACAAGAGCAATATTGAGCTTAAAGCCAATCAAACAGACTTG 1369 Query 31678 ACAAGCTTACAA 31689 | | ||||||| Sbjct 1368 AACAACTTACAA 1357 Score = 190 bits (210), Expect = 5e-44 Identities = 108/110 (98%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 32040 AATCACAAATAAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAAGC 32099 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1297 AATCACAAATCAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAAGC 1238 Query 32100 CAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTACCAC 32149 |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1237 CAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTAACAC 1188 >seq12081 Length=2162 Score = 109 bits (120), Expect = 1e-19 Identities = 87/102 (85%), Gaps = 6/102 (6%) Strand=Plus/Minus Query 33084 ATGGGAAAATATCGGTTCAGCAGTGATTGGTTCAACAACAATATATTATTGGCTACGCAC 33143 |||| ||||||||||||| | ||| ||||||||||||||||||||||||||| |||||| Sbjct 1958 ATGGCAAAATATCGGTTCGGTAGTAATTGGTTCAACAACAATATATTATTGGAAACGCAC 1899 Query 33144 TGCATAAAAACATAAAAAATAGGAGAGTAAAATGAATCAAAT 33185 |||||||||| |||||| |||| | ||||| ||| |||| Sbjct 1898 TGCATAAAAA-ATAAAA---AGGAAAATAAAA--AATGAAAT 1863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120346226622684