Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq1095 113 4e-20
seq1979 82.4 6e-11
>seq1095
Length=312686
Score = 113 bits (124), Expect = 4e-20
Identities = 172/243 (71%), Gaps = 8/243 (3%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|| || | ||| || | |||||||| || ||| ||||||||| ||||||||||| |
Sbjct 84693 CCTCCACGCAACCTCAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 84634
Query 45170 AG---TTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGA 45226
|| | || ||| ||| || || |||||||| || || | | ||| ||||||||
Sbjct 84633 AGGGTTCTGCCATCCTCG---AGCTGCTTTCCGGCAAAGATGAGTCTCTGCTGGTCGGGT 84577
Query 45227 GGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCC 45286
|| | ||||||||||| || || ||| || | | | ||||| ||||
Sbjct 84576 GGAATTCCCTCCTTGTCTTGGATCTTGGCCTTTACATTCTCAATCGTGTCCGACGGCTCC 84517
Query 45287 ACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGC--CTC 45344
||||||| ||||| |||||||| |||| || ||||||||||| ||||| |||| |||
Sbjct 84516 ACCTCCAACGTAATTGTCTTGCCGGTCAACGTTTTCACAAAGATCTGCATTTTGCTGCTC 84457
Query 45345 AAT 45347
|||
Sbjct 84456 AAT 84454
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| || | ||| || ||| || ||||| ||||||||||| ||| | | ||
Sbjct 89305 AACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGTGTTCTGCCATCT 89246
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
||||| || ||||| ||||| || | ||||| || || ||||| | ||| ||||||||
Sbjct 89245 TCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATACCTTCCTTGTCT 89186
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||| || ||| || | | | |||| ||| || |||| ||| || |||
Sbjct 89185 TGAATCTTAGCCTTGACATTCTCGATAGTGTCTGATGGCTCTACTTCCAGGGTGATGGTC 89126
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| ||||||||||| ||||||||||||||
Sbjct 89125 TTGCCGGTCAGAGTCTTTACAAAGATTTGCAT 89094
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| || | ||| || ||| || ||||| ||||||||||| ||| | | ||
Sbjct 89533 AACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGTGTTCTGCCATCT 89474
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
||||| || ||||| ||||| || | ||||| || || ||||| | ||| ||||||||
Sbjct 89473 TCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATACCTTCCTTGTCT 89414
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||| || ||| || | | | |||| ||| || |||| ||| || |||
Sbjct 89413 TGAATCTTAGCCTTGACATTCTCGATAGTGTCTGATGGCTCTACTTCCAGGGTGATGGTC 89354
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| ||||||||||| ||||||||||||||
Sbjct 89353 TTGCCGGTCAGAGTCTTTACAAAGATTTGCAT 89322
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| || | ||| || ||| || ||||| ||||||||||| ||| | | ||
Sbjct 89761 AACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGTGTTCTGCCATCT 89702
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
||||| || ||||| ||||| || | ||||| || || ||||| | ||| ||||||||
Sbjct 89701 TCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATACCTTCCTTGTCT 89642
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||| || ||| || | | | |||| ||| || |||| ||| || |||
Sbjct 89641 TGAATCTTAGCCTTGACATTCTCGATAGTGTCTGATGGCTCTACTTCCAGGGTGATGGTC 89582
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| ||||||||||| ||||||||||||||
Sbjct 89581 TTGCCGGTCAGAGTCTTTACAAAGATTTGCAT 89550
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| || | ||| || ||| || ||||| ||||||||||| ||| | | ||
Sbjct 89989 AACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGTGTTCTGCCATCT 89930
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
||||| || ||||| ||||| || | ||||| || || ||||| | ||| ||||||||
Sbjct 89929 TCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATACCTTCCTTGTCT 89870
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||| || ||| || | | | |||| ||| || |||| ||| || |||
Sbjct 89869 TGAATCTTAGCCTTGACATTCTCGATAGTGTCTGATGGCTCTACTTCCAGGGTGATGGTC 89810
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| ||||||||||| ||||||||||||||
Sbjct 89809 TTGCCGGTCAGAGTCTTTACAAAGATTTGCAT 89778
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| || | ||| || ||| || ||||| ||||||||||| ||| | | ||
Sbjct 90217 AACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGTGTTCTGCCATCT 90158
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
||||| || ||||| ||||| || | ||||| || || ||||| | ||| ||||||||
Sbjct 90157 TCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATACCTTCCTTGTCT 90098
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||| || ||| || | | | |||| ||| || |||| ||| || |||
Sbjct 90097 TGAATCTTAGCCTTGACATTCTCGATAGTGTCTGATGGCTCTACTTCCAGGGTGATGGTC 90038
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| ||||||||||| ||||||||||||||
Sbjct 90037 TTGCCGGTCAGAGTCTTTACAAAGATTTGCAT 90006
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| || | ||| || ||| || ||||| ||||||||||| ||| | | ||
Sbjct 90445 AACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGTGTTCTGCCATCT 90386
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
||||| || ||||| ||||| || | ||||| || || ||||| | ||| ||||||||
Sbjct 90385 TCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATACCTTCCTTGTCT 90326
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||| || ||| || | | | |||| ||| || |||| ||| || |||
Sbjct 90325 TGAATCTTAGCCTTGACATTCTCGATAGTGTCTGATGGCTCTACTTCCAGGGTGATGGTC 90266
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| ||||||||||| ||||||||||||||
Sbjct 90265 TTGCCGGTCAGAGTCTTTACAAAGATTTGCAT 90234
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 8/204 (4%)
Strand=Plus/Minus
Query 45149 TTCTGAATGTTGTAGTCGTTCAG---TTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
||||| ||||||||||| ||| | || ||| ||| || || |||||||| ||
Sbjct 78071 TTCTGGATGTTGTAGTCAGACAGGGTTCTGCCATCTTCG---AGCTGCTTTCCGGCAAAA 78015
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
|| | | ||| |||||||| || | ||||||||||| || || ||| || |
Sbjct 78014 ATAAGTCTCTGCTGGTCGGGTGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTTACATTC 77955
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | ||||| ||||||||||| ||||| |||||||| |||| || ||||||
Sbjct 77954 TCAATCGTGTCCGACGGCTCCACCTCCAACGTAATTGTCTTGCCGGTCAACGTTTTCACA 77895
Query 45326 AAGATTTGCATGTTGC--CTCAAT 45347
||||| ||||| |||| ||||||
Sbjct 77894 AAGATCTGCATTTTGCTGCTCAAT 77871
>seq1979
Length=171087
Score = 82.4 bits (90), Expect = 6e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193
||||| || ||||||||| |||||||||||| ||| ||| |||| ||||| ||
Sbjct 87757 TGCAGTGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGC 87816
Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| |||||||| ||||| |||||||| ||||| ||
Sbjct 87817 TTGCCGGCGAAGATCAAACGCTGTTGATCGGGCGG 87851
Score = 82.4 bits (90), Expect = 6e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193
||||| || ||||||||| |||||||||||| ||| ||| |||| ||||| ||
Sbjct 152562 TGCAGTGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGC 152621
Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| |||||||| ||||| |||||||| ||||| ||
Sbjct 152622 TTGCCGGCGAAGATCAAACGCTGTTGATCGGGCGG 152656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 394851024207718
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