Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq738 277 2e-69
seq2120 123 2e-23
>seq738
Length=407637
Score = 277 bits (306), Expect = 2e-69
Identities = 608/886 (69%), Gaps = 35/886 (4%)
Strand=Plus/Plus
Query 13912 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13971
||||||||||||||| || || ||||||||||| || || ||| || ||| |||||
Sbjct 114299 TTTTTGATATTCACTCACCCTCTTTTCAAAGAAATTTGTCTTATTAATCAATGAAATATT 114358
Query 13972 TTCCATAAAATCAAATGGATTTGTTGACATA--AACACTTTATCACAACCTAGTTCTAAT 14029
||||| ||||| || ||||| | |||| || |||| | | || ||||| | |
Sbjct 114359 ATCCATGAAATCCAAAGGATTA-TGAACATTGTAAATCTTTGA-ATATCCAAGTTCAATT 114416
Query 14030 AGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCA-CAATTCATACCTAT 14088
| ||||||||| |||| || ||||| | | ||| | || | ||||||| |||||
Sbjct 114417 AATAATCTATCAGCAACAAATCTTATATAATTAATCAT-AGATGAGCAATTCAAACCTAA 114475
Query 14089 TAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTAT 14148
| || || || | | | || | ||||||| ||| ||| || || || | |||
Sbjct 114476 AATTTCAACGGGTAATGACTCTGTCAGAAATTCTCCTTCAATATCAACTGCTTCCTGTAT 114535
Query 14149 AAT--AATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAA---A 14203
|| ||| || || || ||| || ||||| || ||| | ||| |
Sbjct 114536 TATTGAATA--AACCTTTGAATCAGATAATTTATGTTTTAAATATTTCCTATATAAGAGA 114593
Query 14204 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTA 14261
|| ||||| |||||||| | | ||||||||||||| |||||||| || ||||| ||||
Sbjct 114594 CATGCAAATTCACAATGTAAGGCCTCATCTCTACTTATAAGTTCATTACTGAAA--GTTA 114651
Query 14262 ATCCTGGCATCAATCCT-CGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAG 14320
| |||||||| ||| | || ||||| |||||||||||||| || || || || |||
Sbjct 114652 AACCTGGCAT-AATATTACGCTTTTTCAACCAAAATATTGCTGCAAAACTCCCAGAGAAG 114710
Query 14321 AATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTC 14380
|| || || ||||| | |||||||||| ||||| ||| | || || |||| |
Sbjct 114711 AAAATCCCTTCAACCACTGCAAACGCTACCAATCGCTCTGCGAAACTTGAATTTTGATCA 114770
Query 14381 GATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCA 14440
|||| |||| | |||||| |||||| | || || || || || || ||
Sbjct 114771 TATATATATTTATTTGCCCATATTCCCTTTTTTCTTATTGAAGGGATGGTCTCTATTGCG 114830
Query 14441 TTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATC-AATAAGTAAGCTATA 14499
||||| | ||| | ||||| | ||| | ||| | || || ||||| |||||||||
Sbjct 114831 TTAAAAAGATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAATAA-TAAGCTATA 114889
Query 14500 CATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTC--T 14557
||| || || ||||| |||||||||| || ||||||| || ||| |||||||||| |
Sbjct 114890 CATCTCTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGCTTCAAT 114949
Query 14558 GACCATTGTACCTC-TGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACT 14616
|| |||||| || ||| | |||||||| |||||| ||| ||| || |||
Sbjct 114950 GA--TTTGTACTTCTTGAAT-GAATCTTTCAATCAAATTATCACCAACAATTGTATCTGA 115006
Query 14617 AGCTGCAAAAAATGC--CAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTG--AGTT 14672
| ||||||||||| ||||||| | ||||| | || || || || || || |
Sbjct 115007 TGAAGCAAAAAATGCAAGAATATGTGAT--ATAAAATGTTTTTCATC--TGATGTCAGCT 115062
Query 14673 TTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAA 14732
| ||||||| | | ||||||||| ||||| || || || ||||||||| || |
Sbjct 115063 TCTTCCAATGAGTAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAAAAAGATGCTA 115122
Query 14733 CAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAA 14778
||| || ||||||| | |||||| || |||||||| |||||
Sbjct 115123 CAGATTGTTTATACTTGTACCATATATCGGGGTATAATATTGGAAA 115168
>seq2120
Length=154726
Score = 123 bits (136), Expect = 2e-23
Identities = 249/358 (70%), Gaps = 16/358 (4%)
Strand=Plus/Minus
Query 14429 GTTTCAATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATC-AAT 14487
|| || || || ||||| | ||| | ||||| | ||| | ||| | || || |||
Sbjct 146121 GTCTCTATTGCGTTAAAAAGATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAAT 146062
Query 14488 AAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACA 14547
|| |||||||||||| || || ||||| |||||||||| || ||||||| || ||| |
Sbjct 146061 AA-TAAGCTATACATCTCTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAA 146003
Query 14548 TCTAGCTTC--TGACCATTGTACCTCT-GAGTAAAATCTTTCGGCCAAATTTTCATTAAC 14604
||||||||| ||| |||||| ||| || | || |||||| |||||| ||| |||
Sbjct 146002 TCTAGCTTCAATGAT--TTGTACTTCTTGAATGAA-TCTTTCAATCAAATTATCACCAAC 145946
Query 14605 TATACCATCACTAGCTGCAAAAAATGC--CAATATGTTTTTAATAAAGTATTGCTCTTCA 14662
|| ||| | ||||||||||| ||||||| | ||||| | || || ||
Sbjct 145945 AATTGTATCTGATGAAGCAAAAAATGCAAGAATATGTGAT--ATAAAATGTTTTTCATC- 145889
Query 14663 TTGCTG--AGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCC 14720
|| || || || ||||||| | | ||||||||| ||||| || || || ||||
Sbjct 145888 -TGATGTCAGCTTCTTCCAATGAGTAATATCCTTAGATAGATCGACCTCTTCTGTGGTCC 145830
Query 14721 AAAAACTAGCAACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAA 14778
| ||| || |||| || ||||||| | |||||| || |||||||| | |||
Sbjct 145829 AGAAAGATGCTACAGATTGTTTATACTTGTACCATATATCGGGGTATAATATTGAAAA 145772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482064886919440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |