Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq1095 127 2e-24
seq1320 93.3 3e-14
>seq1095
Length=312686
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||| || |||| || |||| ||||||||| ||||| || ||||| |||||||| |
Sbjct 82044 TCCTCCACGGAGTCGCAGCACCAAGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCTGA 81985
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| |||| ||| |||||||| ||| || || || |||||||||| || || || ||
Sbjct 81984 TAGTGTTCTACCATCTTCCAGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTGG 81925
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| ||||||||||| || | |||||| | ||| ||| || || ||
Sbjct 81924 AATTCCTTCCTTATCTTGGATCTTAGCCTTGACATTCTCAATAGTATCTGAAGGTTCAAC 81865
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||| | ||||||| |||| || ||||| ||||| |||||||| |||||
Sbjct 81864 TTCCAGGGTGATGGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGCAT 81817
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||| || |||| || |||| ||||||||| ||||| || ||||| |||||||| |
Sbjct 88865 TCCTCCACGGAGTCGCAGCACCAAGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCTGA 88806
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| |||| ||| |||||||| ||| || || || |||||||||| || || || ||
Sbjct 88805 TAGTGTTCTACCATCTTCCAGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTGG 88746
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| ||||||||||| || | |||||| | ||| ||| || || ||
Sbjct 88745 AATTCCTTCCTTATCTTGGATCTTAGCCTTGACATTCTCAATAGTATCTGAAGGTTCAAC 88686
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||| | ||||||| |||| || ||||| ||||| |||||||| |||||
Sbjct 88685 TTCCAGGGTGATGGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGCAT 88638
Score = 125 bits (138), Expect = 5e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
||| || || ||||| || |||| ||| ||||| ||||||||||| ||||||||||| |
Sbjct 90689 TCCACCACGAAGTCTGAGAACCAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAGTCAGA 90630
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
|| ||| ||| ||| |||| ||| || || || |||||||||| || || || ||
Sbjct 90629 CAGGGTTCTACCATCCTCCAGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTGG 90570
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| || ||||| || || | ||| || | | ||| || || ||||||
Sbjct 90569 AATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTTTCAATGGTATCGGAGGGCTCCAC 90510
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | ||||||| | |||||||||| || |||||||| |||||||||
Sbjct 90509 TTCCAAGGTGATGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCATT 90461
Score = 102 bits (112), Expect = 6e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||| || || | | || | ||| || || |||||||| || ||||||||||| |
Sbjct 89321 TCCTCCACGAAGACGCAACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGA 89262
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| |||| | | |||||||| || || || || ||||||| | || ||||| ||
Sbjct 89261 TAGTGTTCTGCCATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGG 89202
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| |||||||| || ||| | |||||| | | | |||||| |||||
Sbjct 89201 AATACCTTCCTTGTCTTGAATCTTAGCCTTGACATTCTCGATAGTGTCTGATGGCTCTAC 89142
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | ||||||| | |||||||||| || |||||||| |||||||||
Sbjct 89141 TTCCAGGGTGATGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCATT 89093
Score = 102 bits (112), Expect = 6e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||| || || | | || | ||| || || |||||||| || ||||||||||| |
Sbjct 89549 TCCTCCACGAAGACGCAACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGA 89490
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| |||| | | |||||||| || || || || ||||||| | || ||||| ||
Sbjct 89489 TAGTGTTCTGCCATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGG 89430
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| |||||||| || ||| | |||||| | | | |||||| |||||
Sbjct 89429 AATACCTTCCTTGTCTTGAATCTTAGCCTTGACATTCTCGATAGTGTCTGATGGCTCTAC 89370
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | ||||||| | |||||||||| || |||||||| |||||||||
Sbjct 89369 TTCCAGGGTGATGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCATT 89321
Score = 102 bits (112), Expect = 6e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||| || || | | || | ||| || || |||||||| || ||||||||||| |
Sbjct 89777 TCCTCCACGAAGACGCAACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGA 89718
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| |||| | | |||||||| || || || || ||||||| | || ||||| ||
Sbjct 89717 TAGTGTTCTGCCATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGG 89658
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| |||||||| || ||| | |||||| | | | |||||| |||||
Sbjct 89657 AATACCTTCCTTGTCTTGAATCTTAGCCTTGACATTCTCGATAGTGTCTGATGGCTCTAC 89598
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | ||||||| | |||||||||| || |||||||| |||||||||
Sbjct 89597 TTCCAGGGTGATGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCATT 89549
Score = 102 bits (112), Expect = 6e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||| || || | | || | ||| || || |||||||| || ||||||||||| |
Sbjct 90005 TCCTCCACGAAGACGCAACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGA 89946
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| |||| | | |||||||| || || || || ||||||| | || ||||| ||
Sbjct 89945 TAGTGTTCTGCCATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGG 89886
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| |||||||| || ||| | |||||| | | | |||||| |||||
Sbjct 89885 AATACCTTCCTTGTCTTGAATCTTAGCCTTGACATTCTCGATAGTGTCTGATGGCTCTAC 89826
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | ||||||| | |||||||||| || |||||||| |||||||||
Sbjct 89825 TTCCAGGGTGATGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCATT 89777
Score = 102 bits (112), Expect = 6e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||| || || | | || | ||| || || |||||||| || ||||||||||| |
Sbjct 90233 TCCTCCACGAAGACGCAACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGA 90174
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| |||| | | |||||||| || || || || ||||||| | || ||||| ||
Sbjct 90173 TAGTGTTCTGCCATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGG 90114
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| |||||||| || ||| | |||||| | | | |||||| |||||
Sbjct 90113 AATACCTTCCTTGTCTTGAATCTTAGCCTTGACATTCTCGATAGTGTCTGATGGCTCTAC 90054
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | ||||||| | |||||||||| || |||||||| |||||||||
Sbjct 90053 TTCCAGGGTGATGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCATT 90005
Score = 102 bits (112), Expect = 6e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||| || || | | || | ||| || || |||||||| || ||||||||||| |
Sbjct 90461 TCCTCCACGAAGACGCAACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGA 90402
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| |||| | | |||||||| || || || || ||||||| | || ||||| ||
Sbjct 90401 TAGTGTTCTGCCATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGG 90342
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| |||||||| || ||| | |||||| | | | |||||| |||||
Sbjct 90341 AATACCTTCCTTGTCTTGAATCTTAGCCTTGACATTCTCGATAGTGTCTGATGGCTCTAC 90282
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | ||||||| | |||||||||| || |||||||| |||||||||
Sbjct 90281 TTCCAGGGTGATGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCATT 90233
>seq1320
Length=267419
Score = 93.3 bits (102), Expect = 3e-14
Identities = 161/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||| | || | ||||| | || || |||||||| || || || || |||||||
Sbjct 95658 TCCTCCTCTAAGACGGAGTACGAGATGGAGAGTTGATTCCTTCTGGATATTATAGTCGGA 95599
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
|| || || |||||||| || || || || |||| || | || || || ||
Sbjct 95598 CAGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTGG 95539
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| || |||||||| |||| ||| || | ||| |||||| ||||||
Sbjct 95538 AATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGAAGGCTCGAC 95479
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAA 18331
||||| |||||| | ||||| |||| ||||| |||||||| |||||||||||
Sbjct 95478 TTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAAATCTGCATTTTTAA 95425
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379128750493710
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