Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq738 241 2e-58
>seq738
Length=407637
Score = 241 bits (266), Expect = 2e-58
Identities = 577/869 (66%), Gaps = 13/869 (1%)
Strand=Plus/Plus
Query 33290 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 33349
|||||| ||||||| ||| | ||||| || ||||| || || |||||| |||||
Sbjct 114299 TTTTTGATATTCACTCACCCTCTTTTCAAAGAAATTTGTCTTATTAATCAATGAAATATT 114358
Query 33350 TTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAAT 33409
||||||||||| || ||||| |||||||||||| ||| | |||| | |||| |
Sbjct 114359 ATCCATGAAATCCAAAGGATTATGAACATTGTAAATCTTTGAATATCCAAGTTCAATTAA 114418
Query 33410 CAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAG 33469
|||||||| || || ||| |||||| | |||| | ||||||| |||| |
Sbjct 114419 TAATCTATCAGCAACAAATCTTATATAATTAATCATAGATGAGCAATTCAAACCTAAAAT 114478
Query 33470 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCAT-TTGTTATAA 33528
|| ||| || | | | | || ||||||||| |||||| || || | ||| ||
Sbjct 114479 TTCAACGGGTAATGACTCTGTCAGAAATTCTCCTTCAATATCAACTGCTTCCTGTATTAT 114538
Query 33529 TAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTT---TAAACATCAAACATG 33585
| ||| ||| || ||| | |||| ||||| || || | | | |||||
Sbjct 114539 TGAAT-AAACCTTTGAATCAGATAATTTATGTTTTAAATATTTCCTATATAAGAGACATG 114597
Query 33586 CGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGG 33645
| || || || || | |||| |||||||| || | ||| ||| || || | || |
Sbjct 114598 CAAATTCACAATGTAAGGCCTCATCTCTACTTATAAGTTCATTACTGAAAGTTAAACCTG 114657
Query 33646 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTC 33705
|||| | ||||||||| | ||||||||| | || || || || ||||| || |
Sbjct 114658 GCATAATATTACGCTTTTTCAACCAAAATATTGCTGCAAAACTCCCAGAGAAGAAAATCC 114717
Query 33706 CTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT---GTCATGTATCC 33762
|||| || | ||||| || | | || |||| | ||| | | |||| |||
Sbjct 114718 CTTCAACCACTGCAAACGCTACCAATCGCTCTGCGAAACTTGAATTTTGATCATATATAT 114777
Query 33763 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGA 33822
| || | ||||| |||| ||| ||| |||| || || ||||| || ||||| |
Sbjct 114778 ATTTATTTGCCCATATTCCCTTTTTTCTTATTGAAGGGATGGTCTCTATTGCGTTAAAAA 114837
Query 33823 GATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCG 33882
||| || || | || || || | |||| || | || | |||||||| || |
Sbjct 114838 GATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAATAATAAGCTATACATCTCTG 114897
Query 33883 AATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCA 33942
|||| || ||||| || | | ||||| | ||||||| ||||||| || | || || |
Sbjct 114898 AATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGCTTCAATGATTTGTA 114957
Query 33943 CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAA 34002
||||| | |||| ||| ||||| ||| || ||| ||| | |||||||
Sbjct 114958 CTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATTGTATCTGATGAAGCAAAAA 115017
Query 34003 ACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGA 34062
| || | | |||| |||||||| |||||| |||| ||| || || ||||||| | | |
Sbjct 115018 ATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTTCTTCCAATGAGTAA 115077
Query 34063 TATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 34122
|||| ||||||| ||| || ||||| |||||||| ||||| | | | |||||||
Sbjct 115078 TATCCTTAGATAGATCGACCTCTTCTGTGGTCCAAAAAGATGCTACAGATTGTTTATACT 115137
Query 34123 TATTCCAGATGTC-----ATGATATTGGA 34146
| | ||| || || || ||||||||
Sbjct 115138 TGTACCATATATCGGGGTATAATATTGGA 115166
Score = 159 bits (176), Expect = 4e-34
Identities = 915/1448 (63%), Gaps = 54/1448 (4%)
Strand=Plus/Plus
Query 62439 GGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCC 62498
||||| | || |||| ||| || |||||||| | ||| ||||| || ||||| ||||
Sbjct 383211 GGTTCAATTGATTCATAATTGCCTAAAATTTGTGAAGTGGATGCGGTAGGCATTTGTGCA 383270
Query 62499 ACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTC 62558
| |||| | |||| || || ||| | ||||| | | ||| |||| |||||||
Sbjct 383271 ATTAATAGAGAGTTTCGAATTCCATATTTACTGATATCTTTTTTCAGATTATCCCAATCA 383330
Query 62559 CAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTG-GCGTA 62617
|| | || ||| | ||| || | || || || ||| | | |
Sbjct 383331 AGAAACTGGGAGGGTTGTTTATTCCATAGATCATACTGCAAAAAGCCCTTGCTGAGTGGA 383390
Query 62618 CGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTA- 62676
| | || | ||| | |||| |||| || || ||| |||| ||| || || || |
Sbjct 383391 CTA-CCAATATAACTGGGATATTGTCCATCATTTCTAGCAAGTTCACAGCTTGCTTCAAG 383449
Query 62677 --ATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCT 62734
||||| ||||| | |||||||| || |||||||| | | | ||| ||
Sbjct 383450 AGATGCA---TAATAGAGAGTTTCAAATATTTTCTTATTCAATTGGATAGATTCTTCACT 383506
Query 62735 ATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGAT 62794
|| |||| ||||| | || || || ||||| || |||| || || || ||
Sbjct 383507 GCCATATGGTATTTTTAAAATCATGAATAGATCAGCTAAACCCTGAATTCCGATCCCAAT 383566
Query 62795 AGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTAT 62854
|||||||| | | ||||| || | ||| | |||| || | ||||||||| ||||| ||
Sbjct 383567 AGGTCTATTTTTTTTATTTGAAAATTCTGTAGCTGGGATTGTATAATAATTCATATCGAT 383626
Query 62855 AATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA 62914
| |||||| |||||| || ||||| || | ||| ||| |||||||||
Sbjct 383627 TAATTTATTTAGATTTTGTGTAACAACTTTTGTAACCTGTCTCAATTTATAAAAATCAAA 383686
Query 62915 TCGCCCATCTAT------TACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGC 62968
| ||| | || ||| | || | ||| | || || |||||||| || ||
Sbjct 383687 TACATTATCATTGGGAACTATAAATTTATTAACTGCTATGGAAGCAAGATTACAGACTGC 383746
Query 62969 TACCTCAT--TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATA 63026
| |||| | || | | |||||| || ||||| || | ||||| || || ||
Sbjct 383747 AATTTCATCTTTTGAT--GAAAATTGTACAATTTCAGTACATAAGTTACTGCATTTTATG 383804
Query 63027 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGA 63086
||||| ||||| ||| ||| |||| | ||| ||||||| | | || || |
Sbjct 383805 GTTCCCAAATTAATTTGGTTAGACTTTCTATTAATACTATCCTTAAATAACAT--ATAGG 383862
Query 63087 GTA--CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGA---CTCGAGCCTTTA 63141
||| ||||||||||| ||| || || || |||| || | ||| || | ||
Sbjct 383863 GTAATCCAGTTTCAATTTGACTATCAATTAT---TTTCATGAACAATTCTCTTGCATCTA 383919
Query 63142 TTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTC 63201
|| |||||| ||||| ||| ||| | ||| | | ||| ||||| | |
Sbjct 383920 TTTGTTCCAAATATCTCTTTTCTTGTTCATATTGTCCATATAGTAATTCAAACTCATTAC 383979
Query 63202 CCCAAACAT-TGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCA 63260
||||||| | || || | ||||||| || |||||||| || ||| | | | |
Sbjct 383980 CCCAAACGTCTGATAGAT-TTGGACATTGATTTGGACACATTAAACTCCAAATTTCATTA 384038
Query 63261 TCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTTGT 63319
| | ||| | |||||| ||||||| | ||||||| | ||| |||| ||||||||
Sbjct 384039 TTTTCCACCCTAGACATAAATAGATCAGACAACCAAAGA-CCATAGAATAAATCTCTTGC 384097
Query 63320 TCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATG 63379
|||| |||| || || || |||| ||||| | || | || || ||||||| |||
Sbjct 384098 TCTAAGTTCATCATTGCCAATATTTTTTTTCAAATTCAAAAATTTCAAAATATCAATATG 384157
Query 63380 CCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTA 63439
||| | || || || || || || | || || || || ||||||||||| | |
Sbjct 384158 CCATGACTCTAAATAGATTGCAATGGCCCCTGGTCG---CTTCCCTCCCTGATCAACCAA 384214
Query 63440 TCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGT 63499
||| | | | ||||| | | | | | | ||| | ||| ||||| | ||| | |
Sbjct 384215 TCTCACAGAGCTATTAAATAAACGAATTGTAGAAATTAGACCATTTGAAACCCCA-GGAT 384273
Query 63500 ACCGGAGATATAGCCTCCACTG--GCACGAATATTACTAATTGATAGACCTATTCCCCCT 63557
| | | || | | ||| || ||| | | | || ||| ||||| ||
Sbjct 384274 A----AATTTTATCATTATCTGTTGCTTTGATACAATGTAAAGCTAAACCAATTCCACCC 384329
Query 63558 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCA 63617
||| ||||| ||||| || || ||| | || ||||| || || || ||||
Sbjct 384330 ATCATATTAGATATTAAAGCACAATTTTTGAGTGTATCATAAATATTGTCAATTGAATCA 384389
Query 63618 TCGATC--ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAA 63675
| || | ||||| || |||||| || | || ||| || | | ||| | ||||| |
Sbjct 384390 -CTTTCCAAAGTTAA-TAAAAAACAACTTGCCAATTGCTGCTGTGGAGTACATGCATTTA 384447
Query 63676 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 63735
|| ||||||| || || || | |||||| || || |||| || || || |
Sbjct 384448 TTAGTGTAGGAGTTGCATGAGTGTAATATTTTTGTGATAGAAGATCATAGGTTTCTCTTA 384507
Query 63736 CTGAGTCTATA----TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGA 63791
| ||| ||| | ||||| || | ||| | || | ||| ||||| || |||
Sbjct 384508 TTTTGTCAATATTGTTACCATT----TATACTTACCGATACTCTCATAAACATATGTTGA 384563
Query 63792 GGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAA 63851
|||||||||| ||| || | ||||||| | ||| ||| |||| || |||||| |
Sbjct 384564 GGTCTTTCAATAATAACATTATCAATTTTCATTAGGTATGATGTTTCTAATGTTTTATAT 384623
Query 63852 CCAAAATA 63859
||||||||
Sbjct 384624 CCAAAATA 384631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629451061902240
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