Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq738 430 1e-115
seq2120 152 5e-32
>seq738
Length=407637
Score = 430 bits (476), Expect = 1e-115
Identities = 1226/1856 (66%), Gaps = 69/1856 (4%)
Strand=Plus/Plus
Query 36814 GATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAA 36873
|| || | || |||||| | ||||||||||||||| || | || || ||||| |||
Sbjct 382833 GAAGCAGCTTGTGTTCTGAAATAATACATTCCAGTCTTCAATCCAGATTTCCATGTATAA 382892
Query 36874 AAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTCATTGATTGA 36933
||||| | | | |||| | | || || |||| ||| |||| ||| ||| ||
Sbjct 382893 AAATGAAGTGAGCATAATTTTTCATGCGTTGGTTTATTCATAAATATATTCAATGACTGC 382952
Query 36934 CTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATC 36993
|||||| ||||||| |||| || ||||| || | || || ||||| |||
Sbjct 382953 GATTGATCAATAAACGGTGCTCTATCAATAGCCATATCAACAAGTGTCTTCTGAGAAATC 383012
Query 36994 TCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTA---AATCTAAATGTTGAATA 37050
||||| || ||| |||| || || | || | |||| | | || || ||||||
Sbjct 383013 TCCCATACTGTTCTATAACATTTCTTCAGATAAGAAGGTATCGATTTTATATTTTGAATT 383072
Query 37051 GAACCATTATGTAACACAATTGTATTCTTT-ATGTCATTATTCCACATATTTCTACTT-- 37107
|| ||||| | || |||| | || | | || | || |||||| | | | |
Sbjct 383073 GATCCATTGTTCCTCATAATT-TCTTGTCTCATTTTATCATTCCAAAGCC--CAGCCTGA 383129
Query 37108 ATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTT 37167
|| | ||| ||| || | | ||||| || |||||| | |||||||| || ||||
Sbjct 383130 ATCAAATCTTTCATTAAATATTTATTTATAATCTGAAACTGACCAGATAAAACCTGTCTT 383189
Query 37168 GTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTA 37227
||||| ||||| ||| ||||||||| || |||| ||| | ||| ||||| || ||
Sbjct 383190 GTATAAATATTTGAAGTTATTGGTTCAATTGATTCATAATTGCCTAAAATTTGTGAAGTG 383249
Query 37228 GATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTC 37287
||||| ||||||||| |||| |||| || |||| | ||||| | || | || ||
Sbjct 383250 GATGCGGTAGGCATTTGTGCAATTAATAGAGAGTTTCGAATTCCATATTTACTGATA-TC 383308
Query 37288 TTTTTT-AGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAA-CCACATATCATATT 37345
|||||| || | || |||||| | ||| | ||||| |||| ||| | |||||| |
Sbjct 383309 TTTTTTCAGATTATCCCAATCA-AGAAACTGGGAGGGTTGTTTATTCCATAGATCATACT 383367
Query 37346 GTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAG 37405
| | || || || || |||| | | |||| | ||| |||| | | || |||
Sbjct 383368 GCAAAAAGCCCTTGCTGAGTGGACTACCAATATAACTGGGATATTGTCCATCATTTCTAG 383427
Query 37406 CTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTA 37465
| ||||| || || | ||| || | |||||||| | ||||| || |||| |||| |
Sbjct 383428 CAAGTTCACAGCTTGCTTCAAGAGATGCATAATAGAGAGTTTCAAATATTTTCTTATTCA 383487
Query 37466 ATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAAT-ATAAACACATCAGCCAAA 37524
|| | | |||||| || | ||| || | ||| || || | |||||| |||
Sbjct 383488 ATTGGATAGATTCTTCACTGCCATATGG-TATTTTTAAAATCATGAATAGATCAGCTAAA 383546
Query 37525 CCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACT 37584
||||||| ||||| || || ||||||| ||| ||||| || ||||| | ||
Sbjct 383547 CCCTGAATTCCGATCCCAATAGGTCTATTTTTTTTATTTGAAA------ATTCTGTAGCT 383600
Query 37585 GG------ATAATAATTGATATCTATTATTTTATTTAGATTTT---TAACTAGTATTTTC 37635
|| ||||||||| ||||| |||| |||||||||||||| |||| | | ||
Sbjct 383601 GGGATTGTATAATAATTCATATCGATTAATTTATTTAGATTTTGTGTAACAACTTTT--- 383657
Query 37636 GTAATTATTCTCAACTTGTCGAACATAAATACGTTATTATT---AAC---AAATTTACTC 37689
|||| |||||| || | || |||||| |||| ||| ||| ||||||| |
Sbjct 383658 GTAACCTGTCTCAATTTATAAAAATCAAATACATTATCATTGGGAACTATAAATTTATTA 383717
Query 37690 AACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACT--AAATTGTATAA 37747
| | || || | |||||||| || |||| |||||||| || | |||||||| ||
Sbjct 383718 ACTGCTATGGAAGCAAGATTACAGACTGCAATTTCATCTT--TTGATGAAAATTGTACAA 383775
Query 37748 TCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTAT 37807
| || ||||| | ||||| || | || ||||||||||| |||| || || ||| |||
Sbjct 383776 TTTCAGTACATAAGTTACTGCATTTTATGGTTCCCAAATTAATTTGGTTAGACTTTCTAT 383835
Query 37808 TACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAG 37867
|| | ||| ||| ||| ||||| || ||| ||| |||||| | || |
Sbjct 383836 TAATACTATCCTTAAATAACATATAGGGTAATCCAGTTTCAATTTGA----CTATCAATT 383891
Query 37868 ATTTCCATAAAC----TTCTTGC-TTTA-ACGATCGCTTTAAtttttttCTTTGTTTCGT 37921
|||| ||| ||| |||||| | || | || || | ||||||| ||| |
Sbjct 383892 ATTTTCATGAACAATTCTCTTGCATCTATTTGTTCCAAATATCTCTTTTCTT--GTTCAT 383949
Query 37922 ATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGC 37981
||| | ||||| | | ||| ||||| ||||| || || ||| ||||||||
Sbjct 383950 ATTGTCCATATAGTAATTCAAACTCATTACCCCAAACGTCTGATAGATTTGGACATTGAT 384009
Query 37982 ATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTA 38041
||||||||||| | ||| ||||| ||||| || | |||||||| ||||| |
Sbjct 384010 TTGGACACATTAAACTCCAAATTTCATTATTTTCCACCCTAGACATAAATAGATCAGACA 384069
Query 38042 CCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTA 38101
||| | || ||||||||| | | |||| ||| || || || | ||| ||| | |
Sbjct 384070 ACCAAAGACCATAGAATAAATCTCTTGCTCTAAGTTCATCATTGCCAATATTTTTTTTCA 384129
Query 38102 AGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTG 38161
| | | ||| | || |||||| ||||||| |||| ||| || | || || ||||
Sbjct 384130 AATTCAAAAATTTCAAAATATCAATATGCCATGACTCTAAATAGATTGCAATGGCCCCTG 384189
Query 38162 GTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAG 38221
||| || |||||||||| || |||| || | | ||||| ||| | | |||
Sbjct 384190 GTCGCTT---CCCTCCCTGATCAACCAATCTCACAGAGCTATTAAATAAACGAATTGTAG 384246
Query 38222 GTACTATACCATTAGATTTGCC-GTTTATACCGGATATATAAGTACCCTTAGCTCGTATA 38280
| || |||||| || || | || | | ||| | || | | ||| |||
Sbjct 384247 AAATTAGACCATTTGAAACCCCAGGATAAA----TTTTATCATTATCTGTTGCTTTGATA 384302
Query 38281 TTACTTATCGACAATCCTATTCCA-CCTGCATGTTTTGATATTAAAGCGCATTGTTTTAA 38339
| || | || || |||||| || ||| || ||||||||||| || | ||| |
Sbjct 384303 CAATGTAAAGCTAAACCAATTCCACCCATCAT-ATTAGATATTAAAGCACAATTTTTGAG 384361
Query 38340 CGTATCAAATATACCTTCTATACTGTCATCCTTT--ATTGGTAGTATAAAACAACTAGAC 38397
|||||| | ||| || || ||| |||| | | || || ||||||||| | |
Sbjct 384362 TGTATCATAAATATTGTCAATTGAATCA--CTTTCCAAAGTTAATAAAAAACAACTTGCC 384419
Query 38398 ATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTT 38457
| ||| || |||||| | || || | || |||||||| |||||| || | |||||
Sbjct 384420 AATTGCTGCTGTGGAGTACATGCATTTATTAGTGTAGGAGTTGCATGAGTGTAATATTTT 384479
Query 38458 TCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGA 38517
| || | | || ||| |||||| ||| | || |||| || | |||| ||
Sbjct 384480 TGTGATAGAAGATCATAGGTTTCTCTTATTTTGTCAATATTGTTACCATTTATACTTACC 384539
Query 38518 GATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGA 38577
||||| ||||| | ||||||||| |||||||| || || ||||| ||| | |||
Sbjct 384540 GATACTCTCATAAACATATGTTGAGGTCTTTCAATAATAACATTATCAATTTTCATTAGG 384599
Query 38578 TACGATTTTTCTAATGTTTTTATTCCAAAATAACTATATGAATAATCTCTATCGTA 38633
|| ||| ||||||||||||| ||||||||| || || |||||||||||| ||
Sbjct 384600 TATGATGTTTCTAATGTTTTATATCCAAAATATGTAAATTCATAATCTCTATCATA 384655
Score = 288 bits (318), Expect = 9e-73
Identities = 604/884 (68%), Gaps = 30/884 (3%)
Strand=Plus/Plus
Query 11339 TTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATAC 11398
|||||||||||||| || | ||| || ||||| |||||| | ||| ||||
Sbjct 114300 TTTTGATATTCACTCACCCTCTTTTCAAAGAAATTTGTCTTATTAATCAATGAAATATTA 114359
Query 11399 TCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAAT 11458
||||| || |||||||||| |||||| | | ||| | | || | || |||||
Sbjct 114360 TCCATGAAATCCAAAGGATTATGAACATTGTAAATCTTTGAATATCCAAGTTCAATTAAT 114419
Query 11459 AATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAGA 11518
|||||||| || || ||| |||||| | | ||| | | ||||||| ||||| ||
Sbjct 114420 AATCTATCAGCAACAAATCTTATATAATTAATCATAGATGAGCAATTCAAACCTAAAATT 114479
Query 11519 TCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTATC 11578
|| || || | | |||||| ||| || ||| |||| ||| || || |||||
Sbjct 114480 TCAACGGGTAATGACTCTGTCAGAAATTCTCCTTCAATATCAACTGCTTCCTGTATTATT 114539
Query 11579 GACGTTATAACTTCC--TTAGATGGTGGATGTAATAAATGTTT---AAACATTAAACACG 11633
|| || | ||| | |||| | |||| ||||| ||| | | | | ||| |
Sbjct 114540 GAA--TAAACCTTTGAATCAGATAATTTATGTTTTAAATATTTCCTATATAAGAGACATG 114597
Query 11634 CAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGG 11693
|||| ||||||||||| | || ||||||||||| ||||||||| || ||||| || |
Sbjct 114598 CAAATTCACAATGTAAGGCCTCATCTCTACTTATAAGTTCATTACTGAAAGTTAAACCTG 114657
Query 11694 GCATCAATCCT-CGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATT 11752
|||| ||| | || ||||| | ||||||||| || ||||| ||||| ||||| ||
Sbjct 114658 GCAT-AATATTACGCTTTTTCAACCAAAATATTGCTGCAAAACTCCCAGAGAAGAAAATC 114716
Query 11753 CCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATACCT---TGTTGCT-AGATAT 11808
|| || || ||||||| ||||| | || ||| | | || | | ||| | | ||||
Sbjct 114717 CCTTCAACCACTGCAAACGCTACCAATCGCTCTGC-GAAACTTGAATTTTGATCATATAT 114775
Query 11809 CCATTTTCTGGCCCA-ATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAA 11867
|||| | ||||| || |||| ||| ||| | || || ||||| |||||||
Sbjct 114776 ATATTTATTTGCCCATATTCCCTTT-TTTCTTATTGAAGGGATGGTCTCTATTGCGTTAA 114834
Query 11868 ATAAATGCATTTTT----TCTATATTATCTCTTACATATGTATCTATTAATAAACTATAC 11923
| | ||| ||| || ||| || ||| | | | || |||| |||||| ||||||
Sbjct 114835 AAAGATG-ATTCTTCTGATCTGTAGATTCTATGA---AAGTTTCTAATAATAAGCTATAC 114890
Query 11924 ATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTC--TG 11981
|| |||||||| ||||||||||||| || |||||| | |||||| ||| || || ||
Sbjct 114891 ATCTCTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGCTTCAATG 114950
Query 11982 AACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAG 12041
| ||||| || | |||||||| ||||| ||| ||||| ||| |
Sbjct 114951 A--TTTGTACTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATTGTATCTGATG 115008
Query 12042 ATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTTATCCC 12101
| ||||||||||| || |||||| |||||| | |||||| ||| || | || | ||
Sbjct 115009 AAGCAAAAAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTTCTTCC 115068
Query 12102 AATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATT 12161
||| | | ||| || |||| ||| || ||||| |||||||||| ||| || ||||
Sbjct 115069 AATGAGTAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAAAAAGATGCTACAGATT 115128
Query 12162 GTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATA 12205
|||||||| | | ||| ||||| | || ||||| | |||||
Sbjct 115129 GTTTATACTTGTACCATATATCGGGGTA--TAATATTGGAAATA 115170
>seq2120
Length=154726
Score = 152 bits (168), Expect = 5e-32
Identities = 253/360 (70%), Gaps = 14/360 (4%)
Strand=Plus/Minus
Query 11852 GTTTCTATAGCGTTAAATAAATGCATTTTT----TCTATATTATCTCTTACATATGTATC 11907
|| ||||| |||||||| | ||| ||| || ||| || ||| | | | || ||
Sbjct 146121 GTCTCTATTGCGTTAAAAAGATG-ATTCTTCTGATCTGTAGATTCTATGAAA---GTTTC 146066
Query 11908 TATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAA 11967
|| |||||| |||||||| |||||||| ||||||||||||| || |||||| | |||||
Sbjct 146065 TAATAATAAGCTATACATCTCTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAA 146006
Query 11968 ACATCGTGCCTC--TGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTT 12025
| ||| || || ||| ||||| || | |||||||| ||||| |||
Sbjct 146005 AAATCTAGCTTCAATGATT--TGTACTTCTTGAATGAATCTTTCAATCAAATTATCACCA 145948
Query 12026 ACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCT 12085
||||| ||| || ||||||||||| || |||||| |||||| | |||||| |||
Sbjct 145947 ACAATTGTATCTGATGAAGCAAAAAATGCAAGAATATGTGATATAAAATGTTTTTCATCT 145888
Query 12086 TTAGTTAATTTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAA 12145
|| | || | ||||| | | ||| || |||| ||| || ||||| ||||||
Sbjct 145887 GATGTCAGCTTCTTCCAATGAGTAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAG 145828
Query 12146 AAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATA 12205
||| ||| || |||||||||||| | | ||| ||||| | || ||||| |||||||
Sbjct 145827 AAAGATGCTACAGATTGTTTATACTTGTACCATATATCGGGGTA--TAATATTGAAAATA 145770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468252130279520
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