Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq738 269 3e-67 seq293 93.3 6e-14 >seq738 Length=407637 Score = 269 bits (298), Expect = 3e-67 Identities = 589/876 (67%), Gaps = 12/876 (1%) Strand=Plus/Plus Query 35866 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATT 35925 |||||| ||||||| ||| | ||||| || ||||| || ||| ||||| ||||| Sbjct 114299 TTTTTGATATTCACTCACCCTCTTTTCAAAGAAATTTGTCTTATTAATCAATGAAATATT 114358 Query 35926 TTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAAT 35985 ||||||||||| || ||||| |||||| ||||| ||| | |||| | |||| | Sbjct 114359 ATCCATGAAATCCAAAGGATTATGAACATTGTAAATCTTTGAATATCCAAGTTCAATTAA 114418 Query 35986 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 36045 |||||||| || |||||| |||||| | |||| | ||||||| |||| || Sbjct 114419 TAATCTATCAGCAACAAATCTTATATAATTAATCATAGATGAGCAATTCAAACCTAAAAT 114478 Query 36046 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 36105 || ||| || | | | | || ||||||||| ||||||| || || || ||| || Sbjct 114479 TTCAACGGGTAATGACTCTGTCAGAAATTCTCCTTCAATATCAACTGCTTCCTGTATTAT 114538 Query 36106 AGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTT---TAAACATCAAACATGC 36162 || || || ||| | || ||||| || || | | | |||||| Sbjct 114539 TGAATAAACCTTTGAATCAGATAATTTATGTTTTAAATATTTCCTATATAAGAGACATGC 114598 Query 36163 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 36222 || || || |||| |||| |||||||| || | ||| || || || | || || Sbjct 114599 AAATTCACAATGTAAGGCCTCATCTCTACTTATAAGTTCATTACTGAAAGTTAAACCTGG 114658 Query 36223 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 36282 ||| | ||||||||| | ||||||||| | ||||| ||||| |||||||| || Sbjct 114659 CATAATATTACGCTTTTTCAACCAAAATATTGCTGCAAAACTCCCAGAGAAGAAAATCCC 114718 Query 36283 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT---GTCATGTATCCA 36339 ||| || | ||||| || | | || |||| | ||| | | | |||| ||| | Sbjct 114719 TTCAACCACTGCAAACGCTACCAATCGCTCTGCGAAACTTGAATTTTGATCATATATATA 114778 Query 36340 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 36399 || | ||||| |||| ||| ||| |||| || |||||||| || ||||| || Sbjct 114779 TTTATTTGCCCATATTCCCTTTTTTCTTATTGAAGGGATGGTCTCTATTGCGTTAAAAAG 114838 Query 36400 ATAGtttttttCATTACTATCTTTAACATATGTATC-AATCAAAAGACTATACATTTCCG 36458 || || || | || || || | | || || ||| | ||| |||||||| || | Sbjct 114839 ATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAATAATAAG-CTATACATCTCTG 114897 Query 36459 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTA 36518 |||| || ||||| || | | |||||| | ||||||| ||||||| || | || |||| Sbjct 114898 AATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGCTTCAATGATTTGTA 114957 Query 36519 CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG--GCTGCAAA 36576 ||||| | |||| ||| ||||| ||| || ||| || ||| | ||||| Sbjct 114958 CTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATT--GTATCTGATGAAGCAAA 115015 Query 36577 AAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATT 36636 ||| || | | |||| |||||||| |||||| | || ||| || || ||||||| | | Sbjct 115016 AAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTTCTTCCAATGAGT 115075 Query 36637 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 36696 ||||| ||||||| ||| || ||||| |||||||| ||||| | | | |||||| Sbjct 115076 AATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAAAAAGATGCTACAGATTGTTTATA 115135 Query 36697 CATATTCCAGATGTCATGATATTGAATTGGAAAAAT 36732 | | | ||| || || | ||| |||||||| || Sbjct 115136 CTTGTACCATATATCGGGGTATAATATTGGAAATAT 115171 Score = 161 bits (178), Expect = 1e-34 Identities = 798/1255 (64%), Gaps = 64/1255 (5%) Strand=Plus/Plus Query 65430 TATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTA---ATGCACCGTAATAAATG 65486 ||| |||| || || ||| |||||||| || || || | ||||| ||||| | Sbjct 383409 TATTGTCCATCATTTCTAGCAAGTTCACAGCTTGCTTCAAGAGATGCA---TAATAGAGA 383465 Query 65487 GTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAG 65546 ||||| || || |||||||| | | | ||| || || |||| ||||| Sbjct 383466 GTTTCAAATATTTTCTTATTCAATTGGATAGATTCTTCACTGCCATATGGTATTTTTAAA 383525 Query 65547 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 65606 | || || || ||||| || |||| || || || |||||||||| | | ||||| Sbjct 383526 ATCATGAATAGATCAGCTAAACCCTGAATTCCGATCCCAATAGGTCTATTTTTTTTATTT 383585 Query 65607 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 65666 || | ||| | |||| || | ||||||||| ||||| || | |||||| |||||| Sbjct 383586 GAAAATTCTGTAGCTGGGATTGTATAATAATTCATATCGATTAATTTATTTAGATTTTGT 383645 Query 65667 ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCATCTAT------T 65720 || ||||| || | ||| ||| |||||||||| | ||| | | Sbjct 383646 GTAACAACTTTTGTAACCTGTCTCAATTTATAAAAATCAAATACATTATCATTGGGAACT 383705 Query 65721 ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCAT--TAGCATCCG 65778 | ||| | || | ||| | || || |||||||| || || | |||| | || | Sbjct 383706 ATAAATTTATTAACTGCTATGGAAGCAAGATTACAGACTGCAATTTCATCTTTTGAT--G 383763 Query 65779 CATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGAT 65838 | |||||| || ||||| || | ||||| || || |||||||| ||||| ||| | Sbjct 383764 AAAATTGTACAATTTCAGTACATAAGTTACTGCATTTTATGGTTCCCAAATTAATTTGGT 383823 Query 65839 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTA--CCAGTTTCAATCTG 65896 || |||| | ||| ||||||| | | || || | ||| ||||||||||| || Sbjct 383824 TAGACTTTCTATTAATACTATCCTTAAATAACAT--ATAGGGTAATCCAGTTTCAATTTG 383881 Query 65897 AGATTCTATAATCGCTTTCCAGACGA---CTCGAGCCTTTATTATAGATTTGTATCTCTT 65953 | || || || |||| || | ||| || | |||| |||||||| Sbjct 383882 ACTATCAATTAT---TTTCATGAACAATTCTCTTGCATCTATTTGTTCCAAATATCTCTT 383938 Query 65954 TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCC 66013 |||| ||| ||| || ||| | | ||| ||||| | |||||||| ||| || Sbjct 383939 TTCTTGTTCATATTGTCCATATAGTAATTCAAACTCATTACCCCAAAC---GTCTGATAG 383995 Query 66014 A---GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCAT 66070 | ||||||| || |||||||| || ||| | | | || | ||| | ||| Sbjct 383996 ATTTGGACATTGATTTGGACACATTAAACTCCAAATTTCATTATTTTCCACCCTAGACAT 384055 Query 66071 AAAGAGATCAGGAATCCAAAGAGCTATA-AATAAATCTCTGGTTCTATGTTCCTCGTTTC 66129 ||| ||||||| | ||||||| | ||| ||||||||||| | |||| |||| || || | Sbjct 384056 AAATAGATCAGACAACCAAAGA-CCATAGAATAAATCTCTTGCTCTAAGTTCATCATTGC 384114 Query 66130 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATA 66189 | |||| ||||| | || | || || ||||||| |||||| | || || || | Sbjct 384115 CAATATTTTTTTTCAAATTCAAAAATTTCAAAATATCAATATGCCATGACTCTAAATAGA 384174 Query 66190 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 66249 | || || | || || || || ||||||||||| | |||| | | | ||||| Sbjct 384175 TTGCAATGGCCCCTGGTCG---CTTCCCTCCCTGATCAACCAATCTCACAGAGCTATTAA 384231 Query 66250 AAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGA-----TATA 66304 | | | | | | ||| | |||||| || ||| || ||| | ||| Sbjct 384232 ATAAACGAATTGTAGAAATTAGACCATTTGA--AACC------CCAGGATAAATTTTATC 384283 Query 66305 GCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 66364 | | |||| ||| | | | || ||| ||||| || ||| ||||| || Sbjct 384284 ATTATCTGTTGCTTTGATACAATGTAAAGCTAAACCAATTCCACCCATCATATTAGATAT 384343 Query 66365 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA---TCCATCATGTT 66421 ||| || || ||| | |||||||| || || || |||| |||| | ||| Sbjct 384344 TAAAGCACAATTTTTGAGTGTATCATAAATATTGTCAATTGAATCACTTTCCA--AAGTT 384401 Query 66422 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 66481 || || |||||| || | || ||| || | ||| | ||||| | || ||||||| Sbjct 384402 AA-TAAAAAACAACTTGCCAATTGCTGCTGTGGAGTACATGCATTTATTAGTGTAGGAGT 384460 Query 66482 AGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATA-- 66539 || || || | |||||| || || |||| || || || | | ||| ||| Sbjct 384461 TGCATGAGTGTAATATTTTTGTGATAGAAGATCATAGGTTTCTCTTATTTTGTCAATATT 384520 Query 66540 --TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 66597 | ||||| || | ||| | || | ||| ||||| || ||||||||||||| | Sbjct 384521 GTTACCATT----TATACTTACCGATACTCTCATAAACATATGTTGAGGTCTTTCAATAA 384576 Query 66598 TCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 66652 | || | ||||||| | ||| ||| |||| || |||||| | |||||||| Sbjct 384577 TAACATTATCAATTTTCATTAGGTATGATGTTTCTAATGTTTTATATCCAAAATA 384631 >seq293 Length=664131 Score = 93.3 bits (102), Expect = 6e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 ||||||| ||||| || ||||||||||||| || || || || || | |||||| | | Sbjct 211508 CACTAAACAGTTTCTTAGTTTCTTTGTGTAAGTTGGAGACTGCAATGCGAGCGGCCAGGA 211567 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 | |||||||| ||||| | || || |||||| || ||||||| |||| | | |||| Sbjct 211568 TTGCATAATCGGGATGACGAGTGGTTAGAGTGGCAGCAGTTTCGGCCGCCAAATTATCCA 211627 Query 66919 ATTCTACCGTTGTTACTCC 66937 ||| || ||||| || || Sbjct 211628 GTTCAACAGTTGTCACACC 211646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657789759884720