Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq738 269 3e-67
seq293 93.3 6e-14
>seq738
Length=407637
Score = 269 bits (298), Expect = 3e-67
Identities = 589/876 (67%), Gaps = 12/876 (1%)
Strand=Plus/Plus
Query 35866 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATT 35925
|||||| ||||||| ||| | ||||| || ||||| || ||| ||||| |||||
Sbjct 114299 TTTTTGATATTCACTCACCCTCTTTTCAAAGAAATTTGTCTTATTAATCAATGAAATATT 114358
Query 35926 TTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAAT 35985
||||||||||| || ||||| |||||| ||||| ||| | |||| | |||| |
Sbjct 114359 ATCCATGAAATCCAAAGGATTATGAACATTGTAAATCTTTGAATATCCAAGTTCAATTAA 114418
Query 35986 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 36045
|||||||| || |||||| |||||| | |||| | ||||||| |||| ||
Sbjct 114419 TAATCTATCAGCAACAAATCTTATATAATTAATCATAGATGAGCAATTCAAACCTAAAAT 114478
Query 36046 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 36105
|| ||| || | | | | || ||||||||| ||||||| || || || ||| ||
Sbjct 114479 TTCAACGGGTAATGACTCTGTCAGAAATTCTCCTTCAATATCAACTGCTTCCTGTATTAT 114538
Query 36106 AGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTT---TAAACATCAAACATGC 36162
|| || || ||| | || ||||| || || | | | ||||||
Sbjct 114539 TGAATAAACCTTTGAATCAGATAATTTATGTTTTAAATATTTCCTATATAAGAGACATGC 114598
Query 36163 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 36222
|| || || |||| |||| |||||||| || | ||| || || || | || ||
Sbjct 114599 AAATTCACAATGTAAGGCCTCATCTCTACTTATAAGTTCATTACTGAAAGTTAAACCTGG 114658
Query 36223 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 36282
||| | ||||||||| | ||||||||| | ||||| ||||| |||||||| ||
Sbjct 114659 CATAATATTACGCTTTTTCAACCAAAATATTGCTGCAAAACTCCCAGAGAAGAAAATCCC 114718
Query 36283 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT---GTCATGTATCCA 36339
||| || | ||||| || | | || |||| | ||| | | | |||| ||| |
Sbjct 114719 TTCAACCACTGCAAACGCTACCAATCGCTCTGCGAAACTTGAATTTTGATCATATATATA 114778
Query 36340 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 36399
|| | ||||| |||| ||| ||| |||| || |||||||| || ||||| ||
Sbjct 114779 TTTATTTGCCCATATTCCCTTTTTTCTTATTGAAGGGATGGTCTCTATTGCGTTAAAAAG 114838
Query 36400 ATAGtttttttCATTACTATCTTTAACATATGTATC-AATCAAAAGACTATACATTTCCG 36458
|| || || | || || || | | || || ||| | ||| |||||||| || |
Sbjct 114839 ATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAATAATAAG-CTATACATCTCTG 114897
Query 36459 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTA 36518
|||| || ||||| || | | |||||| | ||||||| ||||||| || | || ||||
Sbjct 114898 AATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGCTTCAATGATTTGTA 114957
Query 36519 CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG--GCTGCAAA 36576
||||| | |||| ||| ||||| ||| || ||| || ||| | |||||
Sbjct 114958 CTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATT--GTATCTGATGAAGCAAA 115015
Query 36577 AAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATT 36636
||| || | | |||| |||||||| |||||| | || ||| || || ||||||| | |
Sbjct 115016 AAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTTCTTCCAATGAGT 115075
Query 36637 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 36696
||||| ||||||| ||| || ||||| |||||||| ||||| | | | ||||||
Sbjct 115076 AATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAAAAAGATGCTACAGATTGTTTATA 115135
Query 36697 CATATTCCAGATGTCATGATATTGAATTGGAAAAAT 36732
| | | ||| || || | ||| |||||||| ||
Sbjct 115136 CTTGTACCATATATCGGGGTATAATATTGGAAATAT 115171
Score = 161 bits (178), Expect = 1e-34
Identities = 798/1255 (64%), Gaps = 64/1255 (5%)
Strand=Plus/Plus
Query 65430 TATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTA---ATGCACCGTAATAAATG 65486
||| |||| || || ||| |||||||| || || || | ||||| ||||| |
Sbjct 383409 TATTGTCCATCATTTCTAGCAAGTTCACAGCTTGCTTCAAGAGATGCA---TAATAGAGA 383465
Query 65487 GTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAG 65546
||||| || || |||||||| | | | ||| || || |||| |||||
Sbjct 383466 GTTTCAAATATTTTCTTATTCAATTGGATAGATTCTTCACTGCCATATGGTATTTTTAAA 383525
Query 65547 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 65606
| || || || ||||| || |||| || || || |||||||||| | | |||||
Sbjct 383526 ATCATGAATAGATCAGCTAAACCCTGAATTCCGATCCCAATAGGTCTATTTTTTTTATTT 383585
Query 65607 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 65666
|| | ||| | |||| || | ||||||||| ||||| || | |||||| ||||||
Sbjct 383586 GAAAATTCTGTAGCTGGGATTGTATAATAATTCATATCGATTAATTTATTTAGATTTTGT 383645
Query 65667 ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCATCTAT------T 65720
|| ||||| || | ||| ||| |||||||||| | ||| | |
Sbjct 383646 GTAACAACTTTTGTAACCTGTCTCAATTTATAAAAATCAAATACATTATCATTGGGAACT 383705
Query 65721 ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCAT--TAGCATCCG 65778
| ||| | || | ||| | || || |||||||| || || | |||| | || |
Sbjct 383706 ATAAATTTATTAACTGCTATGGAAGCAAGATTACAGACTGCAATTTCATCTTTTGAT--G 383763
Query 65779 CATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGAT 65838
| |||||| || ||||| || | ||||| || || |||||||| ||||| ||| |
Sbjct 383764 AAAATTGTACAATTTCAGTACATAAGTTACTGCATTTTATGGTTCCCAAATTAATTTGGT 383823
Query 65839 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTA--CCAGTTTCAATCTG 65896
|| |||| | ||| ||||||| | | || || | ||| ||||||||||| ||
Sbjct 383824 TAGACTTTCTATTAATACTATCCTTAAATAACAT--ATAGGGTAATCCAGTTTCAATTTG 383881
Query 65897 AGATTCTATAATCGCTTTCCAGACGA---CTCGAGCCTTTATTATAGATTTGTATCTCTT 65953
| || || || |||| || | ||| || | |||| ||||||||
Sbjct 383882 ACTATCAATTAT---TTTCATGAACAATTCTCTTGCATCTATTTGTTCCAAATATCTCTT 383938
Query 65954 TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCC 66013
|||| ||| ||| || ||| | | ||| ||||| | |||||||| ||| ||
Sbjct 383939 TTCTTGTTCATATTGTCCATATAGTAATTCAAACTCATTACCCCAAAC---GTCTGATAG 383995
Query 66014 A---GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCAT 66070
| ||||||| || |||||||| || ||| | | | || | ||| | |||
Sbjct 383996 ATTTGGACATTGATTTGGACACATTAAACTCCAAATTTCATTATTTTCCACCCTAGACAT 384055
Query 66071 AAAGAGATCAGGAATCCAAAGAGCTATA-AATAAATCTCTGGTTCTATGTTCCTCGTTTC 66129
||| ||||||| | ||||||| | ||| ||||||||||| | |||| |||| || || |
Sbjct 384056 AAATAGATCAGACAACCAAAGA-CCATAGAATAAATCTCTTGCTCTAAGTTCATCATTGC 384114
Query 66130 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATA 66189
| |||| ||||| | || | || || ||||||| |||||| | || || || |
Sbjct 384115 CAATATTTTTTTTCAAATTCAAAAATTTCAAAATATCAATATGCCATGACTCTAAATAGA 384174
Query 66190 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 66249
| || || | || || || || ||||||||||| | |||| | | | |||||
Sbjct 384175 TTGCAATGGCCCCTGGTCG---CTTCCCTCCCTGATCAACCAATCTCACAGAGCTATTAA 384231
Query 66250 AAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGA-----TATA 66304
| | | | | | ||| | |||||| || ||| || ||| | |||
Sbjct 384232 ATAAACGAATTGTAGAAATTAGACCATTTGA--AACC------CCAGGATAAATTTTATC 384283
Query 66305 GCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 66364
| | |||| ||| | | | || ||| ||||| || ||| ||||| ||
Sbjct 384284 ATTATCTGTTGCTTTGATACAATGTAAAGCTAAACCAATTCCACCCATCATATTAGATAT 384343
Query 66365 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA---TCCATCATGTT 66421
||| || || ||| | |||||||| || || || |||| |||| | |||
Sbjct 384344 TAAAGCACAATTTTTGAGTGTATCATAAATATTGTCAATTGAATCACTTTCCA--AAGTT 384401
Query 66422 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 66481
|| || |||||| || | || ||| || | ||| | ||||| | || |||||||
Sbjct 384402 AA-TAAAAAACAACTTGCCAATTGCTGCTGTGGAGTACATGCATTTATTAGTGTAGGAGT 384460
Query 66482 AGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATA-- 66539
|| || || | |||||| || || |||| || || || | | ||| |||
Sbjct 384461 TGCATGAGTGTAATATTTTTGTGATAGAAGATCATAGGTTTCTCTTATTTTGTCAATATT 384520
Query 66540 --TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 66597
| ||||| || | ||| | || | ||| ||||| || ||||||||||||| |
Sbjct 384521 GTTACCATT----TATACTTACCGATACTCTCATAAACATATGTTGAGGTCTTTCAATAA 384576
Query 66598 TCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 66652
| || | ||||||| | ||| ||| |||| || |||||| | ||||||||
Sbjct 384577 TAACATTATCAATTTTCATTAGGTATGATGTTTCTAATGTTTTATATCCAAAATA 384631
>seq293
Length=664131
Score = 93.3 bits (102), Expect = 6e-14
Identities = 104/139 (75%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858
||||||| ||||| || ||||||||||||| || || || || || | |||||| | |
Sbjct 211508 CACTAAACAGTTTCTTAGTTTCTTTGTGTAAGTTGGAGACTGCAATGCGAGCGGCCAGGA 211567
Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918
| |||||||| ||||| | || || |||||| || ||||||| |||| | | ||||
Sbjct 211568 TTGCATAATCGGGATGACGAGTGGTTAGAGTGGCAGCAGTTTCGGCCGCCAAATTATCCA 211627
Query 66919 ATTCTACCGTTGTTACTCC 66937
||| || ||||| || ||
Sbjct 211628 GTTCAACAGTTGTCACACC 211646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657789759884720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |