Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq738 266 5e-66 seq2120 125 1e-23 seq412 100 4e-16 >seq738 Length=407637 Score = 266 bits (294), Expect = 5e-66 Identities = 583/870 (67%), Gaps = 15/870 (2%) Strand=Plus/Plus Query 49668 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 49727 |||||| ||||||| ||| | ||||| || ||||| || || |||||| ||||| Sbjct 114299 TTTTTGATATTCACTCACCCTCTTTTCAAAGAAATTTGTCTTATTAATCAATGAAATATT 114358 Query 49728 TTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 49787 ||||||||||| || ||||| |||||| ||||| ||| | |||| | |||| | Sbjct 114359 ATCCATGAAATCCAAAGGATTATGAACATTGTAAATCTTTGAATATCCAAGTTCAATTAA 114418 Query 49788 CAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 49847 |||||||| || |||||| |||||| | |||| | ||||||| |||| || Sbjct 114419 TAATCTATCAGCAACAAATCTTATATAATTAATCATAGATGAGCAATTCAAACCTAAAAT 114478 Query 49848 TTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 49907 || ||| || | | | | || ||||||||| |||||| || || || ||| || Sbjct 114479 TTCAACGGGTAATGACTCTGTCAGAAATTCTCCTTCAATATCAACTGCTTCCTGTATTAT 114538 Query 49908 AGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTT---AAACATCAAACATGC 49964 || ||| || ||| | ||| ||||| ||| | | | | |||||| Sbjct 114539 TGAATAAACCTTTGAATCAGATAATTTATGTTTTAAATATTTCCTATATAAGAGACATGC 114598 Query 49965 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGG 50024 || || || || | |||| |||||||| || ||||| || || || | || || Sbjct 114599 AAATTCACAATGTAAGGCCTCATCTCTACTTATAAGTTCATTACTGAAAGTTAAACCTGG 114658 Query 50025 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCC 50084 ||| | ||||||||| | ||||||||| | ||||| |||||| ||||| || || Sbjct 114659 CATAATATTACGCTTTTTCAACCAAAATATTGCTGCAAAACTCCCAGAGAAGAAAATCCC 114718 Query 50085 TTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGT---CATGTATCCA 50141 ||| || | ||||| || || | || |||| | |||| | | | ||| ||| | Sbjct 114719 TTCAACCACTGCAAACGCTACCAATCGCTCTGCGAAACTTGAATTTTGATCATATATATA 114778 Query 50142 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 50201 || | ||||| |||| ||| ||| |||| || || ||||| || ||||| || Sbjct 114779 TTTATTTGCCCATATTCCCTTTTTTCTTATTGAAGGGATGGTCTCTATTGCGTTAAAAAG 114838 Query 50202 ATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGA 50261 || || || | || || || | |||| || | || | |||||||| || || Sbjct 114839 ATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAATAATAAGCTATACATCTCTGA 114898 Query 50262 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCAC 50321 ||| || ||||| || | | ||||| | ||||||| ||||||| || | || || || Sbjct 114899 ATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGCTTCAATGATTTGTAC 114958 Query 50322 TTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTG--GCTGCAAAA 50379 |||| | |||| |||| ||||| ||| || ||| || ||| | |||||| Sbjct 114959 TTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATT--GTATCTGATGAAGCAAAA 115016 Query 50380 AACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTG 50439 || || | | |||| ||||||||||||||| | | ||| || || ||||||| | | Sbjct 115017 AATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTTCTTCCAATGAGTA 115076 Query 50440 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 50499 ||||| ||||||| ||| || ||||| |||||||| ||||| | | | ||||||| Sbjct 115077 ATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAAAAAGATGCTACAGATTGTTTATAC 115136 Query 50500 ATATTCCAGATGTC-----ATGATATTGGA 50524 | | ||| || || || |||||||| Sbjct 115137 TTGTACCATATATCGGGGTATAATATTGGA 115166 Score = 196 bits (216), Expect = 7e-45 Identities = 925/1450 (64%), Gaps = 56/1450 (4%) Strand=Plus/Plus Query 79110 TGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGC 79169 |||||| | ||||||| ||| || |||||||| | ||| ||||| || ||||| |||| Sbjct 383210 TGGTTCAATTGATTCATAATTGCCTAAAATTTGTGAAGTGGATGCGGTAGGCATTTGTGC 383269 Query 79170 CACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATC 79229 | |||| | |||| || || ||| ||||| | | ||| ||| |||||||| Sbjct 383270 AATTAATAGAGAGTTTCGAATTCCATATTTACTGATATCTTTTTTCAGATTATCCCAATC 383329 Query 79230 CCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACT-AGCGT 79288 || | || || |||||| |||||||| || | || || || || || | Sbjct 383330 AAGAAACTGGGAGGGTTGTTTATTCCATAGATCATACTGCAAAAAGCCCTTGCTGAGTGG 383389 Query 79289 ATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTA 79348 | | || | || | ||| |||| || ||| || | |||||| || || || | Sbjct 383390 ACTA-CCAATATAACTGGGATATTGTCCATCATTTCTAGCAAGTTCACAGCTTGCTTCAA 383448 Query 79349 ATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTAT 79408 | | | ||||| | ||||| || || |||||||| | | | |||| || Sbjct 383449 GAGATGCATAATAGAGAGTTTCAAATATTTTCTTATTCAATTGGATAGATTCTTCACTGC 383508 Query 79409 CAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAG 79468 || |||| ||||| | || || || ||||| || |||| || || || |||| Sbjct 383509 CATATGGTATTTTTAAAATCATGAATAGATCAGCTAAACCCTGAATTCCGATCCCAATAG 383568 Query 79469 GTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAA 79528 |||||| | | ||||| |||| ||| | |||| || | ||||||||| ||||| || | Sbjct 383569 GTCTATTTTTTTTATTTGAAAATTCTGTAGCTGGGATTGTATAATAATTCATATCGATTA 383628 Query 79529 TTTTATTGAGATTCCTGACTATTA-CTTTGACCACATCCTTTAGTTTGAGAAAATCAAAT 79587 |||||| ||||| || || | |||| || | | | ||| |||||||||| Sbjct 383629 ATTTATTTAGATTT-TGTGTAACAACTTTTGTAACCTGTCTCAATTTATAAAAATCAAAT 383687 Query 79588 CGTCCATCTAT------TACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCT 79641 ||| | || ||| | || | || | || || |||||||| || || Sbjct 383688 ACATTATCATTGGGAACTATAAATTTATTAACTGCTATGGAAGCAAGATTACAGACTGCA 383747 Query 79642 ACCTCAT--TAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGG 79699 | |||| | || | | |||||| |||||||| || | |||||| || || |||| Sbjct 383748 ATTTCATCTTTTGAT--GAAAATTGTACAATTTCAGTACATAAGTTACTGCATTTTATGG 383805 Query 79700 TTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAG 79759 |||| ||||| ||| ||| |||| | ||| ||||||| | | || | || Sbjct 383806 TTCCCAAATTAATTTGGTTAGACTTTCTATTAATACTATCCTTAAATAACATATAGGGTA 383865 Query 79760 TACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGA---CTCGAGCCTTTATTA 79816 ||||||||||| ||| || || || |||| || | ||| || | |||| Sbjct 383866 ATCCAGTTTCAATTTGACTATCAATTAT---TTTCATGAACAATTCTCTTGCATCTATTT 383922 Query 79817 TAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCC 79876 | |||||||||||| ||| |||||| ||||| | ||| ||||| | |||| Sbjct 383923 GTTCCAAATATCTCTTTTCTTGTTCATATTGTCCATATAGTAATTCAAACTCATTACCCC 383982 Query 79877 AAACATCGTCTAATCCA---GGACATTCGTCAGGACACATCAACGACCACTCTCCATCAT 79933 ||| ||||| || | ||||||| | |||||||| || ||| | ||| || Sbjct 383983 AAA---CGTCTGATAGATTTGGACATTGATTTGGACACATTAAACTCCAAATTTCATTAT 384039 Query 79934 CCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTT 79992 | || | |||||| ||||||| | ||||||| | ||| |||| |||||| | | Sbjct 384040 TTTCCACCCTAGACATAAATAGATCAGACAACCAAAGA-CCATAGAATAAATCTCTTGCT 384098 Query 79993 CTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGC 80052 ||| | || || || || |||| ||||| | || | || || ||||||| |||| Sbjct 384099 CTAAGTTCATCATTGCCAATATTTTTTTTCAAATTCAAAAATTTCAAAATATCAATATGC 384158 Query 80053 CACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTAT 80112 || | || || || || || || | || ||||| || ||||||||||| | || Sbjct 384159 CATGACTCTAAATAGATTGCAATGGCCCCTGGTCG---CTTCCCTCCCTGATCAACCAAT 384215 Query 80113 CTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTC 80172 || | | | ||||| | | | | | | ||| | |||||| || ||| | Sbjct 384216 CTCACAGAGCTATTAAATAAACGAATTGTAGAAATTAGACCATTTGA--AACC------C 384267 Query 80173 CCGGAGA---TATAGCTTCCACTG--GCACGAATATTACTAATTGATAGACCTATTCCCC 80227 | ||| | | || | | ||| || ||| | | | || ||| ||||| | Sbjct 384268 CAGGATAAATTTTATCATTATCTGTTGCTTTGATACAATGTAAAGCTAAACCAATTCCAC 384327 Query 80228 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTAT 80287 | ||| ||||| ||||| || || ||| | |||||||| || || || || Sbjct 384328 CCATCATATTAGATATTAAAGCACAATTTTTGAGTGTATCATAAATATTGTCAATTGAAT 384387 Query 80288 CATCAATC--ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATT 80345 || | || | ||||| || |||||| || | || ||| || | ||| | ||||| Sbjct 384388 CA-CTTTCCAAAGTTAA-TAAAAAACAACTTGCCAATTGCTGCTGTGGAGTACATGCATT 384445 Query 80346 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAAT 80405 | || ||||||| || || || | |||||| || || |||| || || || | Sbjct 384446 TATTAGTGTAGGAGTTGCATGAGTGTAATATTTTTGTGATAGAAGATCATAGGTTTCTCT 384505 Query 80406 AGCTGATTCTATA----TCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCT 80461 | || ||| | ||||| || | ||||| || | ||| ||||| || | Sbjct 384506 TATTTTGTCAATATTGTTACCATT----TATACTTACCGATACTCTCATAAACATATGTT 384561 Query 80462 GAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAA 80521 |||||||||||| || |||| ||||||| | ||| ||| |||| || |||||| Sbjct 384562 GAGGTCTTTCAATAATAACATTATCAATTTTCATTAGGTATGATGTTTCTAATGTTTTAT 384621 Query 80522 AACCAAAATA 80531 | |||||||| Sbjct 384622 ATCCAAAATA 384631 >seq2120 Length=154726 Score = 125 bits (138), Expect = 1e-23 Identities = 243/356 (68%), Gaps = 6/356 (2%) Strand=Plus/Minus Query 50182 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATC 50241 || ||||| || ||||| |||| || || | || || || | |||| || | Sbjct 146121 GTCTCTATTGCGTTAAAAAGATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAAT 146062 Query 50242 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 50301 || | |||||||| || ||||| || ||||| || | | ||||| | ||||||| || Sbjct 146061 AATAAGCTATACATCTCTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAAT 146002 Query 50302 CTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATT 50361 ||||| || | || || |||||| | |||| |||| ||||| ||| || ||| Sbjct 146001 CTAGCTTCAATGATTTGTACTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATT 145942 Query 50362 CCGTCACTG--GCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTG 50419 || ||| | |||||||| || | | |||| ||||||||||||||| | | || Sbjct 145941 --GTATCTGATGAAGCAAAAAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATG 145884 Query 50420 TTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATG 50479 | || || ||||||| | | ||||| ||||||| ||| || ||||| ||||| || | Sbjct 145883 TCAGCTTCTTCCAATGAGTAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAGAAAG 145824 Query 50480 ATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATA 50535 |||| | | | ||||||| | | ||| || || | ||| ||| ||||||| Sbjct 145823 ATGCTACAGATTGTTTATACTTGTACCATATATCGGGGTATAATATT--GAAAATA 145770 >seq412 Length=567167 Score = 100 bits (110), Expect = 4e-16 Identities = 141/198 (71%), Gaps = 9/198 (5%) Strand=Plus/Plus Query 49995 AATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATAT 50054 ||| || || ||| || ||||| || ||||| || |||||||| |||||||| ||||| Sbjct 173425 AATAAGCTCATTGCTGAAGGTGAGACCAGGCATGAGACCACGCTTCTTAAGCCAGAATAT 173484 Query 50055 GGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTC 50114 ||||||||| || || |||||||| || || || ||||| || || |||| || ||| Sbjct 173485 GGACGCAAAGCTGCCCGAGAAGAAGATGCCCTCAACGGCGGCGAACGCCACAACTCGCTC 173544 Query 50115 TCCATAACTGGC------GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTT 50168 || | |||| |||| | ||||||| ||||| || |||||| | || Sbjct 173545 GCCGAACGTGGCCGTTTGGCTGGC---GATCCACTGCAACGCCCAGTCCGCCTTCCTCTT 173601 Query 50169 TACACAAGGCATCGTTTC 50186 ||||| ||||| || || Sbjct 173602 AACACACGGCATTGTCTC 173619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717850785515120