Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq412 120 4e-22
seq293 100 4e-16
>seq412
Length=567167
Score = 120 bits (132), Expect = 4e-22
Identities = 137/184 (74%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 125370 AAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTG 125429
||||| | |||| | | | |||||||| | | | | | ||| || ||| || |
Sbjct 173595 AAGGCGGACTGGGCGTTGCAGTGGATCGCCAGCCAAACGGCCACGTTCGGCGAGCGAGTT 173536
Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489
||||| ||||||||||| |||||||||||||| ||||| || |||||| |||| || |||
Sbjct 173535 GTGGCGTTCGCCGCCGTTGAGGGCATCTTCTTCTCGGGCAGCTTTGCGTCCATATTCTGG 173476
Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549
|| |||||||| || |||||||| || || || ||| || ||| |||| || || ||
Sbjct 173475 CTTAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCAGCAATGAGCTTATTTCGCGCGAT 173416
Query 125550 GAGG 125553
||||
Sbjct 173415 GAGG 173412
>seq293
Length=664131
Score = 100 bits (110), Expect = 4e-16
Identities = 165/234 (71%), Gaps = 12/234 (5%)
Strand=Plus/Minus
Query 96891 CGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATC 96950
|| |||||||| | || ||||| |||| || |||||||||||||||| || || |
Sbjct 205718 CGTCCAGGCGCGTTCGCGATCTACCTGGAGCCGTGGCACGCGGACGTTTACGAGTTCCTG 205659
Query 96951 GAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTC 97010
|| || || ||| |||| || |||| ||||| | || ||||| || |||||
Sbjct 205658 GACCTGAAGAAGAACACTGGAAAAGAGGAGGTGCGAGCTCGCGATTTGTTCTACGCACTG 205599
Query 97011 TGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTA---CTGGAGCCTAATG 97067
|||||||| || |||||||| || || ||| | || | | |||||||| |||
Sbjct 205598 TGGGTGCCCGACCTGTTCATGCGACGAGT---CGAGGCTGACCAAATGTGGAGCCTCATG 205542
Query 97068 TGCCC---CGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAG 97118
|| || ||||| || |||||||| |||||| ||||| ||||| || |||
Sbjct 205541 TGTCCGCACGACT-GT--CCCGGTCTCTCCGATGTTTGGGGTGAAGAATTCGAG 205491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740627922072080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |