Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq412 120 4e-22 seq293 100 4e-16 >seq412 Length=567167 Score = 120 bits (132), Expect = 4e-22 Identities = 137/184 (74%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 125370 AAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTG 125429 ||||| | |||| | | | |||||||| | | | | | ||| || ||| || | Sbjct 173595 AAGGCGGACTGGGCGTTGCAGTGGATCGCCAGCCAAACGGCCACGTTCGGCGAGCGAGTT 173536 Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 ||||| ||||||||||| |||||||||||||| ||||| || |||||| |||| || ||| Sbjct 173535 GTGGCGTTCGCCGCCGTTGAGGGCATCTTCTTCTCGGGCAGCTTTGCGTCCATATTCTGG 173476 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549 || |||||||| || |||||||| || || || ||| || ||| |||| || || || Sbjct 173475 CTTAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCAGCAATGAGCTTATTTCGCGCGAT 173416 Query 125550 GAGG 125553 |||| Sbjct 173415 GAGG 173412 >seq293 Length=664131 Score = 100 bits (110), Expect = 4e-16 Identities = 165/234 (71%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 96891 CGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATC 96950 || |||||||| | || ||||| |||| || |||||||||||||||| || || | Sbjct 205718 CGTCCAGGCGCGTTCGCGATCTACCTGGAGCCGTGGCACGCGGACGTTTACGAGTTCCTG 205659 Query 96951 GAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTC 97010 || || || ||| |||| || |||| ||||| | || ||||| || ||||| Sbjct 205658 GACCTGAAGAAGAACACTGGAAAAGAGGAGGTGCGAGCTCGCGATTTGTTCTACGCACTG 205599 Query 97011 TGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTA---CTGGAGCCTAATG 97067 |||||||| || |||||||| || || ||| | || | | |||||||| ||| Sbjct 205598 TGGGTGCCCGACCTGTTCATGCGACGAGT---CGAGGCTGACCAAATGTGGAGCCTCATG 205542 Query 97068 TGCCC---CGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAG 97118 || || ||||| || |||||||| |||||| ||||| ||||| || ||| Sbjct 205541 TGTCCGCACGACT-GT--CCCGGTCTCTCCGATGTTTGGGGTGAAGAATTCGAG 205491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740627922072080