Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq1095 107 1e-18
seq738 93.3 3e-14
>seq1095
Length=312686
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|| || | |||||| ||||| || ||||| ||||| || ||||| |||||||| ||
Sbjct 81815 CCTCCACGCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAA 81756
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| | | | ||||| | || || || || | || | ||| || ||||| ||
Sbjct 81755 AGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGG 81696
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|||||||| ||||| || ||| ||||||| | || || |||||| ||| ||
Sbjct 81695 ATTCCTTCCTTGTCTTGGATCTTGGCCTTTACATTCTCGATAGTATCGGATGGTTCAACT 81636
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || ||||| || || |||||||||||||| || || |||||
Sbjct 81635 TCCAAAGTGATGGTCTTGCCGGTCAGAGTTTTTACGAATATCTGCAT 81589
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|| || | |||||| ||||| || ||||| ||||| || ||||| |||||||| ||
Sbjct 88636 CCTCCACGCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAA 88577
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| | | | ||||| | || || || || | || | ||| || ||||| ||
Sbjct 88576 AGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGG 88517
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|||||||| ||||| || ||| ||||||| | || || |||||| ||| ||
Sbjct 88516 ATTCCTTCCTTGTCTTGGATCTTGGCCTTTACATTCTCGATAGTATCGGATGGTTCAACT 88457
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || ||||| || || |||||||||||||| || || |||||
Sbjct 88456 TCCAAAGTGATGGTCTTGCCGGTCAGAGTTTTTACGAATATCTGCAT 88410
Score = 95.1 bits (104), Expect = 9e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|| || ||||| || || || || || || ||||| || ||| |||| | |||||
Sbjct 82025 ACCAAGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCTGATAGTGTTCTACCATCTTCC 81966
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
| ||| || |||||| | || | | || |||||| |||||||||||| || ||
Sbjct 81965 AGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTGGAATTCCTTCCTTATCTTGG 81906
Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334
|| || ||| ||| | || || ||||| | ||| || || | ||| ||||||||
Sbjct 81905 ATCTTAGCCTTGACATTCTCAATAGTATCTGAAGGTTCAACTTCCAGGGTGATGGTTTTT 81846
Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| |||| ||||| |||||||| ||||||
Sbjct 81845 CCAGTCAAGGTTTTGACAAAAATCTGCATA 81816
Score = 95.1 bits (104), Expect = 9e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|| || ||||| || || || || || || ||||| || ||| |||| | |||||
Sbjct 88846 ACCAAGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCTGATAGTGTTCTACCATCTTCC 88787
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
| ||| || |||||| | || | | || |||||| |||||||||||| || ||
Sbjct 88786 AGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTGGAATTCCTTCCTTATCTTGG 88727
Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334
|| || ||| ||| | || || ||||| | ||| || || | ||| ||||||||
Sbjct 88726 ATCTTAGCCTTGACATTCTCAATAGTATCTGAAGGTTCAACTTCCAGGGTGATGGTTTTT 88667
Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| |||| ||||| |||||||| ||||||
Sbjct 88666 CCAGTCAAGGTTTTGACAAAAATCTGCATA 88637
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
|| || || || ||||| || |||||||| || || | || | || || | ||
Sbjct 89068 TGGAGAGTAGATTCTTTCTGGATGTTGTAGTCAGACAGTGTCCTTCCATCCTCCAGCTGC 89009
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| |||||| | || | ||| || |||||| ||| ||||| || ||||| ||| ||
Sbjct 89008 TTTCCAGCGAAAATGAGACGCTGCTGGTCGGGTGGGATTCCCTCCTTGTCTTGAATCTTA 88949
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||| || | || || || || ||| || || || || |||||||| || |||
Sbjct 88948 GCCTTCACGTTCTCAATCGTGTCAGAGGGTTCAACTTCCAATGTGATGGTTTTGCCGGTC 88889
Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363
||||||||||| || ||||||||
Sbjct 88888 AGAGTTTTTACGAAGATTTGCAT 88866
>seq738
Length=407637
Score = 93.3 bits (102), Expect = 3e-14
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 15149 CTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCG 15208
|||||||| | ||| | || ||||| |||||||| || ||||| ||| | ||| |
Sbjct 219689 CTTAAAACCAGATGCAATGTTGAATCCTTTTGTATATTATAATCCATTACGAATCTTGAA 219630
Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268
||||||||||| || || | |||| | ||||||||| || ||||||| ||||||||
Sbjct 219629 TCTTCTAATTGCTTTCCTGAAAATATGAGACGTTGTTGATCTATTGGAATACCTTCTTTA 219570
Query 15269 TCACAAATTTTGCTC-TTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAAT 15327
|| | | | ||| |||| | |||| ||||| | || | ||| | || ||
Sbjct 219569 TCTTTTA-TATACTCTTTTATTAGAGCTATTGTATCAGTTGATTTAATATCAATTGTGAT 219511
Query 15328 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15367
||| | || || || ||| | ||||| || |||||||||
Sbjct 219510 TGTTCTCCCAGTAAGTGTTCTAACAAATATCTGCATATTT 219471
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361973690241078
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |