Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq1095 98.7 8e-16 >seq1095 Length=312686 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 18813 TTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCG 18872 ||||||| |||||||| | ||||| ||| | || |||||||| || || ||||| || | Sbjct 84695 TTCCTCCACGCAACCTCAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAG 84636 Query 18873 CCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGG 18932 || ||| || | ||||| ||||| || || ||| | || ||||||||||| || | Sbjct 84635 ACAGGGTTCTGCCATCCTCGAGCTGCTTTCCGGCAAAGATGAGTCTCTGCTGGTCGGGTG 84576 Query 18933 GCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCG 18992 | | ||||| ||||| || || ||||| | | | || || |||||| Sbjct 84575 GAATTCCCTCCTTGTCTTGGATCTTGGCCTTTACATTCTCAATCGTGTCCGACGGCTCCA 84516 Query 18993 TTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044 || | ||||| || || || || || ||||| ||||| || |||||||| Sbjct 84515 CCTCCAACGTAATTGTCTTGCCGGTCAACGTTTTCACAAAGATCTGCATTTT 84464 Score = 86.0 bits (94), Expect = 5e-12 Identities = 174/255 (68%), Gaps = 4/255 (2%) Strand=Plus/Minus Query 18791 TGAATTATAATATTTTATT-GTT--TTCCTCCTCGCAACCTTAACACCATGTGCAACGTA 18847 ||||| ||| ||| | ||| ||| |||| || || | || | |||| ||| | ||| Sbjct 90714 TGAATAATA-TATGTAATTAGTTGGTTCCACCACGAAGTCTGAGAACCAAGTGGAGTGTA 90656 Query 18848 GACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCA 18907 || || ||||| || ||||| || | || ||| | | |||||||| || || || || Sbjct 90655 GATTCTTTTTGGATGTTGTAGTCAGACAGGGTTCTACCATCCTCCAGTTGCTTTCCAGCG 90596 Query 18908 TAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACC 18967 | |||||||||||||| || || | ||||| ||||| || || || || Sbjct 90595 AAGATAAGTCTCTGCTGGTCGGGTGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTCACG 90536 Query 18968 TGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTG 19027 | | | |||||| |||||| ||| | ||| ||||| || || || | ||| || Sbjct 90535 TTTTCAATGGTATCGGAGGGCTCCACTTCCAAGGTGATGGTCTTGCCGGTCAGAGTCTTT 90476 Query 19028 ACAAAAATTTGCATT 19042 ||||| ||||||||| Sbjct 90475 ACAAAGATTTGCATT 90461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414337560769852