Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq1095 98.7 8e-16
>seq1095
Length=312686
Score = 98.7 bits (108), Expect = 8e-16
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 18813 TTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCG 18872
||||||| |||||||| | ||||| ||| | || |||||||| || || ||||| || |
Sbjct 84695 TTCCTCCACGCAACCTCAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAG 84636
Query 18873 CCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGG 18932
|| ||| || | ||||| ||||| || || ||| | || ||||||||||| || |
Sbjct 84635 ACAGGGTTCTGCCATCCTCGAGCTGCTTTCCGGCAAAGATGAGTCTCTGCTGGTCGGGTG 84576
Query 18933 GCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCG 18992
| | ||||| ||||| || || ||||| | | | || || ||||||
Sbjct 84575 GAATTCCCTCCTTGTCTTGGATCTTGGCCTTTACATTCTCAATCGTGTCCGACGGCTCCA 84516
Query 18993 TTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044
|| | ||||| || || || || || ||||| ||||| || ||||||||
Sbjct 84515 CCTCCAACGTAATTGTCTTGCCGGTCAACGTTTTCACAAAGATCTGCATTTT 84464
Score = 86.0 bits (94), Expect = 5e-12
Identities = 174/255 (68%), Gaps = 4/255 (2%)
Strand=Plus/Minus
Query 18791 TGAATTATAATATTTTATT-GTT--TTCCTCCTCGCAACCTTAACACCATGTGCAACGTA 18847
||||| ||| ||| | ||| ||| |||| || || | || | |||| ||| | |||
Sbjct 90714 TGAATAATA-TATGTAATTAGTTGGTTCCACCACGAAGTCTGAGAACCAAGTGGAGTGTA 90656
Query 18848 GACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCA 18907
|| || ||||| || ||||| || | || ||| | | |||||||| || || || ||
Sbjct 90655 GATTCTTTTTGGATGTTGTAGTCAGACAGGGTTCTACCATCCTCCAGTTGCTTTCCAGCG 90596
Query 18908 TAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACC 18967
| |||||||||||||| || || | ||||| ||||| || || || ||
Sbjct 90595 AAGATAAGTCTCTGCTGGTCGGGTGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTCACG 90536
Query 18968 TGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTG 19027
| | | |||||| |||||| ||| | ||| ||||| || || || | ||| ||
Sbjct 90535 TTTTCAATGGTATCGGAGGGCTCCACTTCCAAGGTGATGGTCTTGCCGGTCAGAGTCTTT 90476
Query 19028 ACAAAAATTTGCATT 19042
||||| |||||||||
Sbjct 90475 ACAAAGATTTGCATT 90461
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414337560769852
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |