Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_005069.1 Length=46339 Score E Sequences producing significant alignments: (Bits) Value seq1173 107 6e-19 >seq1173 Length=295699 Score = 107 bits (118), Expect = 6e-19 Identities = 151/205 (74%), Gaps = 13/205 (6%) Strand=Plus/Plus Query 23638 ACCGGGCGTAGGAACCTGA--ACCCCATCGGCGGCAC-ATACACGCTAGGCGTGtttttt 23694 |||||| ||||||||||| | | | |||| ||| | || ||| | |||| |||||| Sbjct 140021 ACCGGGTGTAGGAACCTGTGTATCTTACTGGCGACACCAGACGCGCCATGCGTCTTTTTT 140080 Query 23695 tGTGTCT-----ATGCCTGAGCACAGCC--AAATTATGGCAGTCCAGGCGGAGCAGCTTT 23747 | ||| | |||| ||| | | ||||||||| | |||| || ||| | || Sbjct 140081 TACGTCGCAAAAACGCCTAGGCATACCTGTAAATTATGGTGGCTCAGGTGGGGCATCCTT 140140 Query 23748 CGAGCTGGCCGGTATCCGTTGGGGCCGGTATTCCTACCTCCGTTTGGGCTGCCACCCCAT 23807 | | ||||||||||| || || |||||||||||||| |||| |||||| ||| ||||| Sbjct 140141 TGTGGTGGCCGGTATCAGTAAGG-CCGGTATTCCTACCCCCGTCTGGGCTACCA-CCCAT 140198 Query 23808 AGAGTGTAGGAACTCTGGTGGTAGC 23832 |||||||||||||| |||||||| Sbjct 140199 -GAGTGTAGGAACTCCAGTGGTAGC 140222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148081284085596