Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq1095 107 2e-18
>seq1095
Length=312686
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039
||||||| || | | || |||||| || ||||||||||| || || || ||||| ||
Sbjct 82045 TTCCTCCACGGAGTCGCAGCACCAAGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCTG 81986
Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099
| ||| || |||||||| ||| || || || | ||||| ||||| || ||| |
Sbjct 81985 ATAGTGTTCTACCATCTTCCAGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTG 81926
Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159
| | ||||| || || || || || || | ||| || ||| ||||||
Sbjct 81925 GAATTCCTTCCTTATCTTGGATCTTAGCCTTGACATTCTCAATAGTATCTGAAGGTTCAA 81866
Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||||| ||| |||||||| || ||||| |||||||||||||| |||||
Sbjct 81865 CTTCCAGGGTGATGGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGCAT 81817
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039
||||||| || | | || |||||| || ||||||||||| || || || ||||| ||
Sbjct 88866 TTCCTCCACGGAGTCGCAGCACCAAGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCTG 88807
Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099
| ||| || |||||||| ||| || || || | ||||| ||||| || ||| |
Sbjct 88806 ATAGTGTTCTACCATCTTCCAGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTG 88747
Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159
| | ||||| || || || || || || | ||| || ||| ||||||
Sbjct 88746 GAATTCCTTCCTTATCTTGGATCTTAGCCTTGACATTCTCAATAGTATCTGAAGGTTCAA 88687
Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||||| ||| |||||||| || ||||| |||||||||||||| |||||
Sbjct 88686 CTTCCAGGGTGATGGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGCAT 88638
Score = 105 bits (116), Expect = 6e-18
Identities = 173/249 (69%), Gaps = 3/249 (1%)
Strand=Plus/Minus
Query 19964 AATATATTTTATCATTT---TCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCT 20020
||||||| | || | || ||| || || | || | ||||| || ||||||||||||
Sbjct 90709 AATATATGTAATTAGTTGGTTCCACCACGAAGTCTGAGAACCAAGTGGAGTGTAGATTCT 90650
Query 20021 TTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATA 20080
||||| |||||||| || || ||| || ||| |||| ||| || || || | |||
Sbjct 90649 TTTTGGATGTTGTAGTCAGACAGGGTTCTACCATCCTCCAGTTGCTTTCCAGCGAAGATA 90590
Query 20081 AGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCA 20140
|| ||||| || ||| || | || || ||||| || || ||||| | ||
Sbjct 90589 AGTCTCTGCTGGTCGGGTGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTTTCA 90530
Query 20141 ACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAA 20200
| | |||| || ||| ||||| ||| ||||| |||||||||| || || |||||
Sbjct 90529 ATGGTATCGGAGGGCTCCACTTCCAAGGTGATGGTCTTGCCGGTCAGAGTCTTTACAAAG 90470
Query 20201 ATTTGCATT 20209
|||||||||
Sbjct 90469 ATTTGCATT 90461
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419349115470798
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |