Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq1095 107 2e-18 >seq1095 Length=312686 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 ||||||| || | | || |||||| || ||||||||||| || || || ||||| || Sbjct 82045 TTCCTCCACGGAGTCGCAGCACCAAGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCTG 81986 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | ||| || |||||||| ||| || || || | ||||| ||||| || ||| | Sbjct 81985 ATAGTGTTCTACCATCTTCCAGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTG 81926 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||||| || || || || || || | ||| || ||| |||||| Sbjct 81925 GAATTCCTTCCTTATCTTGGATCTTAGCCTTGACATTCTCAATAGTATCTGAAGGTTCAA 81866 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| ||| |||||||| || ||||| |||||||||||||| ||||| Sbjct 81865 CTTCCAGGGTGATGGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGCAT 81817 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 ||||||| || | | || |||||| || ||||||||||| || || || ||||| || Sbjct 88866 TTCCTCCACGGAGTCGCAGCACCAAGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCTG 88807 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | ||| || |||||||| ||| || || || | ||||| ||||| || ||| | Sbjct 88806 ATAGTGTTCTACCATCTTCCAGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTG 88747 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||||| || || || || || || | ||| || ||| |||||| Sbjct 88746 GAATTCCTTCCTTATCTTGGATCTTAGCCTTGACATTCTCAATAGTATCTGAAGGTTCAA 88687 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| ||| |||||||| || ||||| |||||||||||||| ||||| Sbjct 88686 CTTCCAGGGTGATGGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGCAT 88638 Score = 105 bits (116), Expect = 6e-18 Identities = 173/249 (69%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 19964 AATATATTTTATCATTT---TCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCT 20020 ||||||| | || | || ||| || || | || | ||||| || |||||||||||| Sbjct 90709 AATATATGTAATTAGTTGGTTCCACCACGAAGTCTGAGAACCAAGTGGAGTGTAGATTCT 90650 Query 20021 TTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATA 20080 ||||| |||||||| || || ||| || ||| |||| ||| || || || | ||| Sbjct 90649 TTTTGGATGTTGTAGTCAGACAGGGTTCTACCATCCTCCAGTTGCTTTCCAGCGAAGATA 90590 Query 20081 AGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCA 20140 || ||||| || ||| || | || || ||||| || || ||||| | || Sbjct 90589 AGTCTCTGCTGGTCGGGTGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTTTCA 90530 Query 20141 ACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAA 20200 | | |||| || ||| ||||| ||| ||||| |||||||||| || || ||||| Sbjct 90529 ATGGTATCGGAGGGCTCCACTTCCAAGGTGATGGTCTTGCCGGTCAGAGTCTTTACAAAG 90470 Query 20201 ATTTGCATT 20209 ||||||||| Sbjct 90469 ATTTGCATT 90461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419349115470798