Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq738 253 2e-62
seq2120 132 4e-26
>seq738
Length=407637
Score = 253 bits (280), Expect = 2e-62
Identities = 603/887 (68%), Gaps = 37/887 (4%)
Strand=Plus/Plus
Query 12841 ATTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTT 12900
||| ||||| || || |||||||||||| || || || |||||||| || ||||| ||
Sbjct 114281 ATTAGACATTACTGATGATTTTTGATATTCACTCACCCTCTTTTCAAAGAAATTTGTCTT 114340
Query 12901 -TCCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTT 12959
| || || |||||||| ||||| ||||| |||||||| | ||||| | | | ||
Sbjct 114341 ATTAATC-AATGAAATATTATCCATGAAATCCAAAGGATTAT--GAACATTGTAAATCTT 114397
Query 12960 T--ACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAA 13017
| | | || | ||| | ||| ||||| ||||||||||| ||| || | |||| |
Sbjct 114398 TGAATATCCAAGTTCAATTAATAATCTATCAGCAACAAATCTTATATAATTAATCAT-AG 114456
Query 13018 ATCA-CAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTA 13076
|| | || |||| |||| | || || || | | ||||| | ||| | | ||| |
Sbjct 114457 ATGAGCAATTCAAACCTAAAATTTCAACGGGTAATGACTCTGTCAGAAATTCTCCTTCAA 114516
Query 13077 TATCAACTGCTTCGATAACTATGTCTCTTATTACGTTC---TC---TAATGGAGGATTTG 13130
||||||||||||| | ||| | | | || || || |||| | | |||
Sbjct 114517 TATCAACTGCTTCCTGTATTAT-TGAATAA--ACCTTTGAATCAGATAATTTATGTTTTA 114573
Query 13131 ATAGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTA 13190
| | | || | | | ||||||||| ||||| || || | |||||||||||||| |
Sbjct 114574 AATATTTCCTATATAAGAGACATGCAAATTCACAATGTAAGGCCTCATCTCTACTTATAA 114633
Query 13191 GCTCGTT--TGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGC 13248
| || || ||||| |||| ||| ||||||| || ||||| | ||||||||| ||
Sbjct 114634 GTTCATTACTGAAA--GTTAAACCTGGCATAATATTACGCTTTTTCAACCAAAATATTGC 114691
Query 13249 AGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACC 13308
||||| || || || || || |||||||| |||||||||||| ||| | || |
Sbjct 114692 TGCAAAACTCCCAGAGAAGAAAATCCCTTCAACCACTGCAAACGCTACCAATCGCTCTGC 114751
Query 13309 ATACGTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGT-TTAACGC 13367
| | ||||| | | ||| | || | ||||| || | |||| | ||| |
Sbjct 114752 GAAACTTGAATTTTGATCATATATATATTTATTTGCCCATATTCCCTTTTTTCTTATTGA 114811
Query 13368 AGTTCATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATAT--A 13425
|| || | |||||||||||||| | || ||| || | | |||| | ||| |
Sbjct 114812 AGGG-ATGGTCTCTATTGCGTTAAAAAGATGATTCTTCTGAT--CTGTAGATTCTATGAA 114868
Query 13426 AGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACC 13485
||| |||| |||||||||||||| |||||||| ||||||||||| | || ||| ||||
Sbjct 114869 AGTTTCTAATAATAAGCTATACATCTCTGAATGTATATTTTCCATAGTTAATTGAAAACT 114928
Query 13486 ATAAAAACATCTAGCCTC--TGATACCTGAACTTC-GGAGTAAAATCTTTCTGCTAAGTT 13542
|| ||| ||||||| || |||| || ||||| || | |||||||| || ||
Sbjct 114929 GTAGAAAAATCTAGCTTCAATGAT--TTGTACTTCTTGAAT-GAATCTTTCAATCAAATT 114985
Query 13543 TTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAG--TATGTGCTTAATAAAtttt 13600
|| ||| || || | ||||||||| ||||| |||||| | ||||| | |
Sbjct 114986 ATCACCAACAATTGTATCTGATGAAGCAAAAAATGCAAGAATATGTGAT--ATAAAATGT 115043
Query 13601 ttttCGTTTTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCA 13660
||||| | | || || ||| ||||| | || ||| || |||| ||| ||||| ||
Sbjct 115044 TTTTCATCTGATGTCAGCTTCTTCCAATGAGTAATATCCTTAGATAGATCGACCTCTTCT 115103
Query 13661 ACGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCATATATC 13707
|||||||||||| || |||| | |||||| | |||||||||
Sbjct 115104 GTGGTCCAAAAAGATGCTACAGATTGTTTATACTTGTACCATATATC 115150
>seq2120
Length=154726
Score = 132 bits (146), Expect = 4e-26
Identities = 236/336 (70%), Gaps = 14/336 (4%)
Strand=Plus/Minus
Query 13379 TCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATAT--AAGTATCTATCA 13436
|||||||||||||| | || ||| || | | |||| | ||| |||| |||| |
Sbjct 146118 TCTATTGCGTTAAAAAGATGATTCTTCTGAT--CTGTAGATTCTATGAAAGTTTCTAATA 146061
Query 13437 ATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATC 13496
||||||||||||| |||||||| ||||||||||| | || ||| |||| || ||| |||
Sbjct 146060 ATAAGCTATACATCTCTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATC 146001
Query 13497 TAGCCTC--TGATACCTGAACTTC-GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTA 13553
|||| || |||| || ||||| || | |||||||| || || || ||| |
Sbjct 146000 TAGCTTCAATGAT--TTGTACTTCTTGAAT-GAATCTTTCAATCAAATTATCACCAACAA 145944
Query 13554 TCCCGTCACTAGCAGCaaaaaaaGCAAG--TATGTGCTTAATAAAttttttttCGTTTTC 13611
| || | ||||||||| ||||| |||||| | ||||| | |||||| | |
Sbjct 145943 TTGTATCTGATGAAGCAAAAAATGCAAGAATATGTGAT--ATAAAATGTTTTTCATCTGA 145886
Query 13612 TGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAA 13671
|| || ||| ||||| | || ||| || |||| ||| ||||| || |||||| ||
Sbjct 145885 TGTCAGCTTCTTCCAATGAGTAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAGAA 145826
Query 13672 AGAAGCAACAGCCTTCTTATACATCATCCATATATC 13707
||| || |||| | |||||| | |||||||||
Sbjct 145825 AGATGCTACAGATTGTTTATACTTGTACCATATATC 145790
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430737849542316
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |