Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_005822.1 Length=32172 Score E Sequences producing significant alignments: (Bits) Value seq13052 369 8e-98 >seq13052 Length=1690 Score = 369 bits (408), Expect = 8e-98 Identities = 269/312 (86%), Gaps = 0/312 (0%) Strand=Plus/Minus Query 27432 AAGGGAGAATTCACGCTTATAATTCCTACTGAGATGACAGTATCAGGATTAATAAAATCA 27491 |||||||| || | | |||||||||| || ||||||| | | ||| | || || | Sbjct 1668 AAGGGAGAGTTTATTTTAGTAATTCCTACCGAAATGACAGAAACTGGAGTTATTGAAGCG 1609 Query 27492 AATTTAATACTTCTCAATGAAGATAAAGAACAAGTTATTGTCAGTAAGAATTTAACATTT 27551 || |||||||||||||||||||||||||| || ||||| ||||| ||||| | || ||| Sbjct 1608 AACTTAATACTTCTCAATGAAGATAAAGAGCAGGTTATCGTCAGCAAGAACCTTACGTTT 1549 Query 27552 ATATCAGATGATTCTACAGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGAT 27611 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1548 ATATCAGATAATTCTACGGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGAT 1489 Query 27612 TTTACAAAATTATTATTGGAAAACATGCCACAAGTTATGCGTAGTGAGTTGAATGATTTA 27671 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| Sbjct 1488 TTTACAAAATTATTATTGGAAAATATGCCACAAGTAATGCGTAGTGAGTTGAATGACTTA 1429 Query 27672 CATGCTCAAACTGAATCAAACAAGAGCAATATTGAACTTAAAGCAAATTTAGCTGATATG 27731 ||||||||||||||||||||||||||||||||||| |||||||| ||| | | || || Sbjct 1428 CATGCTCAAACTGAATCAAACAAGAGCAATATTGAGCTTAAAGCCAATCAAACAGACTTG 1369 Query 27732 ACTAGCTTACAA 27743 | | ||||||| Sbjct 1368 AACAACTTACAA 1357 Score = 190 bits (210), Expect = 4e-44 Identities = 108/110 (98%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 28094 AATCACAAATAAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAAGC 28153 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1297 AATCACAAATCAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAAGC 1238 Query 28154 CAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTACCAC 28203 |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1237 CAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTAACAC 1188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 102771948398664