Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_005822.1
Length=32172
Score E
Sequences producing significant alignments: (Bits) Value
seq13052 369 8e-98
>seq13052
Length=1690
Score = 369 bits (408), Expect = 8e-98
Identities = 269/312 (86%), Gaps = 0/312 (0%)
Strand=Plus/Minus
Query 27432 AAGGGAGAATTCACGCTTATAATTCCTACTGAGATGACAGTATCAGGATTAATAAAATCA 27491
|||||||| || | | |||||||||| || ||||||| | | ||| | || || |
Sbjct 1668 AAGGGAGAGTTTATTTTAGTAATTCCTACCGAAATGACAGAAACTGGAGTTATTGAAGCG 1609
Query 27492 AATTTAATACTTCTCAATGAAGATAAAGAACAAGTTATTGTCAGTAAGAATTTAACATTT 27551
|| |||||||||||||||||||||||||| || ||||| ||||| ||||| | || |||
Sbjct 1608 AACTTAATACTTCTCAATGAAGATAAAGAGCAGGTTATCGTCAGCAAGAACCTTACGTTT 1549
Query 27552 ATATCAGATGATTCTACAGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGAT 27611
||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1548 ATATCAGATAATTCTACGGTTACAGATTTAGCTCAAGAAGTAAATAATAAGATTGATGAT 1489
Query 27612 TTTACAAAATTATTATTGGAAAACATGCCACAAGTTATGCGTAGTGAGTTGAATGATTTA 27671
||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct 1488 TTTACAAAATTATTATTGGAAAATATGCCACAAGTAATGCGTAGTGAGTTGAATGACTTA 1429
Query 27672 CATGCTCAAACTGAATCAAACAAGAGCAATATTGAACTTAAAGCAAATTTAGCTGATATG 27731
||||||||||||||||||||||||||||||||||| |||||||| ||| | | || ||
Sbjct 1428 CATGCTCAAACTGAATCAAACAAGAGCAATATTGAGCTTAAAGCCAATCAAACAGACTTG 1369
Query 27732 ACTAGCTTACAA 27743
| | |||||||
Sbjct 1368 AACAACTTACAA 1357
Score = 190 bits (210), Expect = 4e-44
Identities = 108/110 (98%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 28094 AATCACAAATAAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAAGC 28153
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1297 AATCACAAATCAAAATGTAACAACTGCTCAAGAAACAGCAAAACAAGCTGAAAGTGAAGC 1238
Query 28154 CAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTACCAC 28203
|||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1237 CAAAAATGCAATGGCAAAGGCTACCGAAGCACAAGCGAACAGTTTAACAC 1188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 102771948398664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |