Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq3617 104 2e-17 >seq3617 Length=57851 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 25401 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCT 25460 ||||| | || |||||| || || | || ||||||| || ||| |||||| ||| Sbjct 14071 GGCTCACGCTGCAGCTGAACTTTGAGTGCGTCGACGTGATTCAAGTAAACGTGACAGTCG 14012 Query 25461 CCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTG 25520 || | ||||| || || || || ||||| || || || |||| ||| |||||||||||| Sbjct 14011 CCTATCGTGTGCACGAATTCACCTGGTTCCAGGCCCGTCACGTGAGCTATCATGTACGTG 13952 Query 25521 AGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCC 25555 || || |||||||||| ||||| || ||||| || Sbjct 13951 AGAAGCGAGTAGCTGGCTATGTTGAATGGTACACC 13917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339944597209734