Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_005856.1
Length=94800
Score E
Sequences producing significant alignments: (Bits) Value
seq2118 482 1e-131
seq1173 104 1e-17
>seq2118
Length=155287
Score = 482 bits (534), Expect = 1e-131
Identities = 805/1160 (69%), Gaps = 10/1160 (1%)
Strand=Plus/Plus
Query 71480 ACCGATTGATTTGATAACACTTGCTGAAGCACTTGAACAGAACGGTAAATTAGAACGCGC 71539
||| |||||||| || || | ||||| | | |||||| | || |||| || |||
Sbjct 16881 ACCAATTGATTTAATTACTTTATCTGAATCGTTAGAACAGCAAGGCGAATTGGATAGCGT 16940
Query 71540 CGGTGGTTTTGCGTACCTTGCGGAGATGTCAAAGAACACGCCCAGCTCGGCAAATATTTG 71599
|||||||||||| || | || || | | || || || || || | || || |||
Sbjct 16941 CGGTGGTTTTGCCTATTTAGCAGAATTAGCTAAAAATACCCCAAGTGCTGCCAACATTAA 17000
Query 71600 TGCTTATGCGGATATCGTTCGTGAACGCGCGGTTGTTCGTGAAATGATTTCCGTCGCAAA 71659
|||||||| ||||| || || ||||| || ||||| ||||| |||||| | || |||||
Sbjct 17001 CGCTTATGCAGATATTGTGCGCGAACGTGCTGTTGTGCGTGACATGATTGCGGTGGCAAA 17060
Query 71660 TGAAATAGCCGAAGCTGGATATG---CGCAGGATGGCAGGGGCAGCAATGAATTGCTGGA 71716
||| || || || || || |||| | || | | |||| |||| | || || |||||
Sbjct 17061 TGAGATCGCTGATGCGGGTTATGATCCTCAAGGTCGCAG---CAGCGAAGAGTTACTGGA 17117
Query 71717 TATGGCCGAGCGCCGCGTTTTTGAAATAGCTGAAAAACGACAAAAGAGCGGTAGTGGTCC 71776
| | || || || |||||| |||| || |||| || || | | | |||||
Sbjct 17118 TTTAGCTGAATCACGTGTTTTTCAAATTGCAGAAACTCGTGCTAATAAAGATGACGGTCC 17177
Query 71777 AAAAGATATCGCCAGCATTCTCGATGCAACGGTATCTCGCATAGAAGAGTTGTTTCAGCG 71836
|||| || | || || || ||||| || ||| |||| | ||||
Sbjct 17178 GAAAGGGATTGAAGAGATCCTGTCTGAGACGGTGGAAAAAATTGAACAGTTATATCAGAA 17237
Query 71837 ACCACATGATGGTGTAACGGGGCTTGATACGGGATTTACC--GATCTCAATAAGAAGACG 71894
|| ||||||| ||||| || | ||| || | ||| ||||| || || |||
Sbjct 17238 GCCTTATGATGGCGTAACCGGTGTCTCTACCGGCT--ACCAGGATCTGGATCGAAAAACG 17295
Query 71895 GCAGGGCTTCAGCCGTCCGATCTCATCATTGTCGCCGCCCGCCCATCTATGGGGAAGACC 71954
||||| | || || ||||| || || || || || || || || ||||| || |||
Sbjct 17296 GCAGGATTACAAAACTCTGATCTGATTATCGTAGCAGCTCGTCCTTCCATGGGTAAAACC 17355
Query 71955 ACGTTTGCGATGAATCTCGTCGAAAATGCCGCAGTTCGTAACGATAAGCCCGTATTGGTT 72014
|| |||||||||||| | ||| |||| || | | || || || || ||| ||
Sbjct 17356 ACTTTTGCGATGAATTTATGTGAACATGCGGCCATGATAGAAGAAAAACCGGTTTTGATT 17415
Query 72015 TTTAGCCTTGAGATGCCGAGCCACCAGCTGATGATGCGCTCACTGGCTTCTCTTGCACGC 72074
||||| | || |||||| | || | |||||||| | |||||| | | ||
Sbjct 17416 TTTAGTTTGGAAATGCCGGCTAATCAAATCATGATGCGTATGTTAGCTTCTTTATCGCGT 17475
Query 72075 GTTGATCAGACTCGTATTCGGACAGGGCAACTTAACGACGAGGATTGGGCGCGGGTTTCT 72134
|||||||| ||||||||||| || || |||||| | ||||| ||||||||||| ||||
Sbjct 17476 GTTGATCAAACTCGTATTCGAACTGGCCAACTTGATGACGAAGATTGGGCGCGTATTTCC 17535
Query 72135 GGCGCAATGGGTATTCTGTTGGACAAGCAGAATATTTTTATTGATGACTCAAGCGCCCTG 72194
| | ||||| | || |||| || | ||||| | |||||||||||| | |
Sbjct 17536 AGTACCATGGGGTTGTTGATGGAAAAACGCAATATGTATATTGATGACTCCGCTGGGTTA 17595
Query 72195 ACGCCGACAGAGCTACGTTCCCGCGCTCGTCGTGTTTATAAAGAAAATGGTGGTTTGAGC 72254
||||||||||| | ||||| || ||||| || ||||| ||| |||||||||| ||
Sbjct 17596 ACGCCGACAGAAGTTCGTTCACGTGCTCGCCGGGTTTACCGTGAACATGGTGGTTTAAGT 17655
Query 72255 ATGATTATGATCGACTACCTGCAACTTATGCGCGTCCCCGAGCTGCAAGATAACCGAACG 72314
| ||||||||||| || || || |||||||| || || ||| ||||| || ||
Sbjct 17656 CTAATTATGATCGATTATCTTCAGCTTATGCGAGTTCCTTCTCTGTCTGATAATCGTACA 17715
Query 72315 CTGGAAATTGCCGAGATTTCTCGCTCACTGAAGGCGTTGGCGAAGGAATTACAAGTACCG 72374
|| || |||||||| ||||| || || || || | ||||| || || |||||||||||
Sbjct 17716 CTTGAGATTGCCGAAATTTCCCGTTCGCTTAAATCATTGGCAAAAGAGTTACAAGTACCT 17775
Query 72375 GTGGTGGCATTGTCACAACTTAATCGATCGCTTGAACAGCGTGCGGACAAACGACCGGTA 72434
||| | |||||||||||||||||||| || ||||| | ||||| || ||||||
Sbjct 17776 GTGATCGCATTGTCACAACTTAATCGTAGCCTGGAACAAAGAGCGGATAAGAAACCGGTC 17835
Query 72435 AATTCAGATTTACGTGAATCAGGAGCAATTGAGCAGGACGCAGACCTGATTATGTTTCTG 72494
|||||||||||||| ||||| || | ||||||||||| || || | ||||||||| |
Sbjct 17836 AATTCAGATTTACGGGAATCCGGCTCCATTGAGCAGGATGCCGATTTAATTATGTTTATT 17895
Query 72495 TATCGCGACGAAGTTTATCACCCGGATAGCGAAATGAAGGGCATTGCCGAGGTAATTATC 72554
||||| || || |||||| || || || | || || | || || | ||||||
Sbjct 17896 TATCGAGATGAGGTTTATAACGATAATTCAGATCTTAAAGGGGTAGCAGAAATTATTATC 17955
Query 72555 GGAAAGCAACGAAATGGCCCAATTGGCACGGTGAGATTGGCTTTTAACGGCCAATACTCA 72614
|| ||||| || |||||||| ||||| || || | || |||| || || |||| |||
Sbjct 17956 GGTAAGCAGCGTAATGGCCCGATTGGAACAGTACGTCTGACTTTCAATGGACAATGGTCA 18015
Query 72615 CGGTTTGATAACTATGCCGG 72634
|| |||||||||||||| ||
Sbjct 18016 CGTTTTGATAACTATGCTGG 18035
>seq1173
Length=295699
Score = 104 bits (114), Expect = 1e-17
Identities = 190/273 (70%), Gaps = 4/273 (1%)
Strand=Plus/Minus
Query 31778 CTGAGCGCCCTGGGTTAAAAAAGGTACTCCGTATGCTTTCCAGAGGT-GATACCCTGGTC 31836
|||| ||||| ||||||| | ||| |||||| | ||||| ||||| |||||
Sbjct 93642 CTGAACGCCCAGGGTTAACCAGAACACTGGAAATGCTT-CGAGAGGGCGATACGCTGGTT 93584
Query 31837 GTATGGAAGTTAGACCGTCTTGGGCGCAGCATGCGTCACTTAGTTGTGCTGGTGGAAGAG 31896
|||||||| | || ||||| || || ||| | || | |||| | | | ||||
Sbjct 93583 GTATGGAAACTCGATCGTCTGGGTCGTAGCGTAAAACAGCTTGTTGATATCGCTGGAGAG 93524
Query 31897 CTGCGTGA-CAGAGGCATTAACTTCCGGAGTCTCACTGACTCCATCGACACCAGTACACC 31955
|||| | ||| |||||| | ||| |||||||| || | || || ||| | |||||
Sbjct 93523 CTGCACAAACAG-GGCATTCAGTTCAAAAGTCTCACGGATGCTATTGATACCGGAACACC 93465
Query 31956 AATGGGGCGCTTTTTCTTTCACGTAATGGGGGCGCTGGCAGAAATGGAACGTGAGCTTAT 32015
|||||| |||||||| || || |||| || ||||||||||| || ||| | ||
Sbjct 93464 GTCGGGGCGTTTTTTCTTCCATGTTATGGCTAGCCTTGCAGAAATGGAGCGAGAGTTGAT 93405
Query 32016 CGTTGAACGTACACGCGCTGGACTTGATGCAGC 32048
| |||||||| || || || |||||| ||||
Sbjct 93404 AATCGAACGTACGCGGGCAGGTCTTGATTCAGC 93372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 303063136577118
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |