Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq364 111 9e-20 >seq364 Length=604170 Score = 111 bits (122), Expect = 9e-20 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 3902 GGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTG 3961 || || || || |||| ||||||||||| ||||| || | || |||| |||| || Sbjct 53499 GGATTTTCCGTGCAGGGCCAAGAAAATATTCAAGAGATTCTGTCTAAAAGACTGTACCTG 53558 Query 3962 TGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTT 4021 ||||| | | |||||||| | ||| | ||||| ||||| |||| |||| ||||| Sbjct 53559 TGTCAGTTCCTTGTTGCATTGTTCATCGTTCGAATCGGTGGCCATTTTGTTTGTAAATTG 53618 Query 4022 TTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAAT 4081 || || || || |||| || || | ||| | || ||| | ||||| ||||| || | Sbjct 53619 TTTGACATTTTCTCACCGTTCAGCGTTGGACTGGTTTATCTCATGTACAGATCGTTCGAA 53678 Query 4082 CGTATTTGTATTTTCAAACCACATTCATCGCGACCGGCCAATTCTGAAAGATAT 4135 |||| || || |||||| |||| |||| |||||||||||||| ||| Sbjct 53679 AGTATATGCATACATAAACCAAATTCTAGTAGACCTGCCAATTCTGAAAGGTAT 53732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276396676400674