Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq734 114 7e-21
seq1357 111 8e-20
seq1236 111 8e-20
seq238 111 8e-20
>seq734
Length=408397
Score = 114 bits (126), Expect = 7e-21
Identities = 82/94 (87%), Gaps = 1/94 (1%)
Strand=Plus/Minus
Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496
|| ||||| |||| | ||||||||||| |||||||||| |||||||||||||||||
Sbjct 253549 AAATAATACAAAAA-ATATTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTA 253491
Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530
|| ||||||||| |||||||||||||||||||||
Sbjct 253490 GCCCGACGCTCTAACCAACTGAGCTAATGGGCCG 253457
Score = 104 bits (114), Expect = 1e-17
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
||||||||| |||||||||| ||||||||||||||||||| ||||||||| ||||||
Sbjct 241086 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCTCGACGCTCTAACCAAC 241027
Query 11516 TGAGCTAATGGGCC 11529
||||||||||||||
Sbjct 241026 TGAGCTAATGGGCC 241013
Score = 87.8 bits (96), Expect = 9e-13
Identities = 76/96 (79%), Gaps = 13/96 (14%)
Strand=Plus/Minus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
||||||| ||||||||||| |||||||||| ||||||||||||||||||| ||||
Sbjct 83522 AAAAAAT---ATTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCCCGAC 83466
Query 11504 G----------CTCTRACCAACTGAGCTAATGGGCC 11529
| |||| ||||||||||||||||||||
Sbjct 83465 GCTCTAACCAACTCTAACCAACTGAGCTAATGGGCC 83430
>seq1357
Length=262802
Score = 111 bits (122), Expect = 8e-20
Identities = 76/86 (88%), Gaps = 3/86 (3%)
Strand=Plus/Plus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
||||||| ||||||||||| |||||||||| |||||||||||||||||||| |||
Sbjct 79223 AAAAAAT---ATTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCAGGAC 79279
Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529
||||| ||||||||||||||||||||
Sbjct 79280 GCTCTAACCAACTGAGCTAATGGGCC 79305
>seq1236
Length=282681
Score = 111 bits (122), Expect = 8e-20
Identities = 69/75 (92%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 246712 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 246653
Query 11516 TGAGCTAATGGGCCG 11530
|||||||||||||||
Sbjct 246652 TGAGCTAATGGGCCG 246638
>seq238
Length=715386
Score = 111 bits (122), Expect = 8e-20
Identities = 76/86 (88%), Gaps = 3/86 (3%)
Strand=Plus/Plus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
|||||||| |||||||||| |||||||||| ||||||||||||||||||| ||||
Sbjct 111565 AAAAAATC---TTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCTCGAC 111621
Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529
||||| ||||||||||||||||||||
Sbjct 111622 GCTCTAACCAACTGAGCTAATGGGCC 111647
Lambda K H
0.639 0.410 0.921
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261342823192408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |