Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1095 104 2e-17 seq71 84.2 2e-11 >seq1095 Length=312686 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | |||||||| || | || || || | |||||| | ||| | || | Sbjct 90461 AATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCTTGGAAGTGGAGCCCTC 90520 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||| ||||| || | || || ||||| ||||| || || || || ||||| || Sbjct 90521 CGATACCATTGAAAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATTCCACCCGACCA 90580 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || ||||| || | || || || ||||| || |||| ||||| | | ||||| || Sbjct 90581 GCAGAGACTTATCTTCGCTGGAAAGCAACTGGAGGATGGTAGAACCCTGTCTGACTACAA 90640 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| |||||||||||||| |||| |||| || |||||| | || |||| Sbjct 90641 CATCCAAAAAGAATCTACACTCCACTTGGTTCTCAGACTTCGTGGTGGAA 90690 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | || |||||||| | || || ||| | ||||| | ||| | ||| | Sbjct 88865 AATGCAAATCTTCGTAAAAACTCTGACCGGCAAAACCATCACATTGGAAGTTGAACCCTC 88924 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| || ||| | || || |||||| ||||| || || || || ||||| || Sbjct 88925 TGACACGATTGAGAACGTGAAGGCTAAGATTCAAGACAAGGAGGGAATCCCACCCGACCA 88984 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-AC-GTCAGCGACTAT 26945 || | ||||||| || || || || || || |||| || | || ||| | |||| Sbjct 88985 GCAGCGTCTCATTTTCGCTGGAAAGCAGCTGGAGGATGGAAGGACACTGTCTG--ACTAC 89042 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||||| || |||||||||||| |||| || || || | ||| | ||||||| Sbjct 89043 AACATCCAGAAAGAATCTACTCTCCACCTTGTGTTGCGTCTTCGTGGAGGAA 89094 >seq71 Length=1040180 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729 |||| |||||||| | |||||| | || | ||| | || ||||| ||||| | Sbjct 300735 AAACTCATGATGATTTGTGGAATTCAGCAGAAGTGCAGTTGTTGAAAGAGGGAAAAATAC 300794 Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789 | || | ||| || ||||||||||| || |||||||| || ||||| | || || Sbjct 300795 ATGGTTTCCTGCGAATGTACTGGGCAAAGAAGATTCTTGAATGGACGACTTCCCCTGAAG 300854 Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849 | || || || || |||||||| || |||| ||||||| | || || | ||||| | Sbjct 300855 AAGCACTTGAAATATCCATTTATCTCAATGATAAATACAGTATGGATGGCAGAGATCCCA 300914 Query 71850 ACGGTTATGTCGGT 71863 |||||| || ||| Sbjct 300915 ACGGTTTCGTTGGT 300928 Score = 82.4 bits (90), Expect = 7e-11 Identities = 131/186 (70%), Gaps = 4/186 (2%) Strand=Plus/Plus Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729 |||| |||||||| | |||||| | || | ||| | || ||||| ||||| | Sbjct 313651 AAACTCATGATGATTTGTGGAATTCAGCAGAAGTGCAGTTGTTGAAAGAGGGAAAAATAC 313710 Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCC--GA 71787 | || | ||| || ||||||||||| || |||||||| ||||||| | | ||||| || Sbjct 313711 ATGGTTTCCTGCGAATGTACTGGGCAAAGAAGATTCTTGAGTGGA--CGACCTCCCCTGA 313768 Query 71788 GCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCC 71847 | || || || || |||||||| || |||| ||||||| | || || | ||||| Sbjct 313769 AGAAGCACTTGAAATATCCATTTATCTCAATGATAAATACAGTATGGATGGCAGAGATCC 313828 Query 71848 TAACGG 71853 || || Sbjct 313829 CAATGG 313834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478383830449760