Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq1095 104 2e-17
seq71 84.2 2e-11
>seq1095
Length=312686
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827
||||||| | |||||||| || | || || || | |||||| | ||| | || |
Sbjct 90461 AATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCTTGGAAGTGGAGCCCTC 90520
Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887
||| ||||| || | || || ||||| ||||| || || || || ||||| ||
Sbjct 90521 CGATACCATTGAAAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATTCCACCCGACCA 90580
Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947
|| ||||| || | || || || ||||| || |||| ||||| | | ||||| ||
Sbjct 90581 GCAGAGACTTATCTTCGCTGGAAAGCAACTGGAGGATGGTAGAACCCTGTCTGACTACAA 90640
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997
||| |||||||||||||| |||| |||| || |||||| | || ||||
Sbjct 90641 CATCCAAAAAGAATCTACACTCCACTTGGTTCTCAGACTTCGTGGTGGAA 90690
Score = 93.3 bits (102), Expect = 4e-14
Identities = 162/232 (70%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827
||||||| | || |||||||| | || || ||| | ||||| | ||| | ||| |
Sbjct 88865 AATGCAAATCTTCGTAAAAACTCTGACCGGCAAAACCATCACATTGGAAGTTGAACCCTC 88924
Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887
||||| || ||| | || || |||||| ||||| || || || || ||||| ||
Sbjct 88925 TGACACGATTGAGAACGTGAAGGCTAAGATTCAAGACAAGGAGGGAATCCCACCCGACCA 88984
Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-AC-GTCAGCGACTAT 26945
|| | ||||||| || || || || || || |||| || | || ||| | ||||
Sbjct 88985 GCAGCGTCTCATTTTCGCTGGAAAGCAGCTGGAGGATGGAAGGACACTGTCTG--ACTAC 89042
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997
||||| || |||||||||||| |||| || || || | ||| | |||||||
Sbjct 89043 AACATCCAGAAAGAATCTACTCTCCACCTTGTGTTGCGTCTTCGTGGAGGAA 89094
>seq71
Length=1040180
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729
|||| |||||||| | |||||| | || | ||| | || ||||| ||||| |
Sbjct 300735 AAACTCATGATGATTTGTGGAATTCAGCAGAAGTGCAGTTGTTGAAAGAGGGAAAAATAC 300794
Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789
| || | ||| || ||||||||||| || |||||||| || ||||| | || ||
Sbjct 300795 ATGGTTTCCTGCGAATGTACTGGGCAAAGAAGATTCTTGAATGGACGACTTCCCCTGAAG 300854
Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849
| || || || || |||||||| || |||| ||||||| | || || | ||||| |
Sbjct 300855 AAGCACTTGAAATATCCATTTATCTCAATGATAAATACAGTATGGATGGCAGAGATCCCA 300914
Query 71850 ACGGTTATGTCGGT 71863
|||||| || |||
Sbjct 300915 ACGGTTTCGTTGGT 300928
Score = 82.4 bits (90), Expect = 7e-11
Identities = 131/186 (70%), Gaps = 4/186 (2%)
Strand=Plus/Plus
Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729
|||| |||||||| | |||||| | || | ||| | || ||||| ||||| |
Sbjct 313651 AAACTCATGATGATTTGTGGAATTCAGCAGAAGTGCAGTTGTTGAAAGAGGGAAAAATAC 313710
Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCC--GA 71787
| || | ||| || ||||||||||| || |||||||| ||||||| | | ||||| ||
Sbjct 313711 ATGGTTTCCTGCGAATGTACTGGGCAAAGAAGATTCTTGAGTGGA--CGACCTCCCCTGA 313768
Query 71788 GCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCC 71847
| || || || || |||||||| || |||| ||||||| | || || | |||||
Sbjct 313769 AGAAGCACTTGAAATATCCATTTATCTCAATGATAAATACAGTATGGATGGCAGAGATCC 313828
Query 71848 TAACGG 71853
|| ||
Sbjct 313829 CAATGG 313834
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478383830449760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |