Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq738 163 7e-35
seq293 111 4e-19
seq412 93.3 1e-13
>seq738
Length=407637
Score = 163 bits (180), Expect = 7e-35
Identities = 324/467 (69%), Gaps = 16/467 (3%)
Strand=Plus/Minus
Query 22483 TTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTT 22542
||||| || || | | || ||||| ||||||||||| |||||||| ||||| | |||
Sbjct 114754 TTCGCAGAGCGATTGGTAGCGTTTGCAGTGGTTGAAGGGATTTTCTTCTCTGG-GAGTTT 114696
Query 22543 TG-TGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCA--AAT 22599
|| ||||| |||||| | ||||| ||| |||||||| ||| |||| ||||| |||
Sbjct 114695 TGCAGCAATATTTTGGTTGAAAAAGCGTAATATTATGCCAGGTTTAAC--TTTCAGTAAT 114638
Query 22600 GAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAAT 22659
|| | || || ||||||||| | ||| || ||||| ||| | ||||| ||||
Sbjct 114637 GAACTTATAAGTAGAGATGAGGCCTTACATTGTGAATTTGCATGTCTCTTATATAGGAAA 114578
Query 22660 CATATCATTCATAAACTTCCATATGAAACTGTACTTGAT-ATTATTACA-AATGCAGTTG 22717
|| | | |||||| | | || || || || | | || |||| | |||||||
Sbjct 114577 TATTTAAAACATAAATTATCTGATTCAAAGGT--TTATTCAATAATACAGGAAGCAGTTG 114520
Query 22718 AACTTGAACGTCTATTTATTTGCGAGGCGTTACCAGT--AAGTCTCATTGGTATCAATGC 22775
| ||||| | |||| | ||| | ||||| || || | | | ||| | |||
Sbjct 114519 ATATTGAAGGAGAATTTCTGACAGAGTCATTACCCGTTGAAATTT--TAGGTTTGAATTG 114462
Query 22776 CGAATCAATGAGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTA 22835
| ||| |||| || ||||| | ||||||||| ||| | |||||||| ||| || ||
Sbjct 114461 CTCATCTATGATTAATTATATAAGATTTGTTGCTGATAGATTATTAATTGAACTTGGATA 114402
Query 22836 TGCAAAGCATTATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGG 22895
| ||||| ||| || || |||||| || || | ||||| ||||||| ||||
Sbjct 114401 TTCAAAGATTTACAATGTTCATAATCCTTTGGATTTCATGGATAATATTTCA-TTGATTA 114343
Query 22896 A-AAGACCAATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCA 22941
| ||||| |||||||| ||||| || || ||||||| |||||| ||
Sbjct 114342 ATAAGACAAATTTCTTTGAAAAGAGGGTGAGTGAATATCAAAAATCA 114296
>seq293
Length=664131
Score = 111 bits (122), Expect = 4e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 363837 AGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCT 363896
||| ||||| || || || || ||||| || || || ||| ||||| || || ||
Sbjct 205713 AGGCGCGTTCGCGATCTACCTGGAGCCGTGGCACGCGGACGTTTACGAGTTCCTGGACCT 205654
Query 363897 CCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGT 363956
||| ||||| ||||||||||| |||| || || ||| ||||||| ||||| |||||
Sbjct 205653 GAAGAAGAACACTGGAAAAGAGGAGGTGCGAGCTCGCGATTTGTTCTACGCACTGTGGGT 205594
Query 363957 TTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACA 364016
| |||| || ||| || || ||||| | | | ||| ||| | || || ||
Sbjct 205593 GCCCGACCTGTTCATGCGACGAGTCGAGGCTGACCAAATGTGGAGCCTCATGTGTCCGCA 205534
Query 364017 CGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGA 364052
||| ||||| ||||| |||||||| |||||||| ||
Sbjct 205533 CGACTGTCCCGGTCTCTCCGATGTTTGGGGTGAAGA 205498
Score = 100 bits (110), Expect = 7e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 364126 TTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCG 364185
|| || ||||| || |||||||||||||| || |||||||| ||| | ||||| || |
Sbjct 204110 TTCGCGATCATTGACTCGCAGATTGAGACGGGCACACCCTACATGCTCTACAAGGACGCC 204051
Query 364186 TGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACC 364245
||||||||||||||||||||| |||| || ||||| || ||||| | || ||
Sbjct 204050 GCTAACCGCAAGTCCAACCAGCAGAACCTGGGAACAATCAAGTGCAGCAATTTGTGCACA 203991
Query 364246 GAGATTATTGAATACACCGC 364265
||||| | || ||||| ||
Sbjct 203990 GAGATCGTCGAGTACACGGC 203971
>seq412
Length=567167
Score = 93.3 bits (102), Expect = 1e-13
Identities = 84/106 (79%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 22845 TTATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAA 22904
||| ||||| | || ||||| || | ||||||| ||||| || ||||||||||| ||
Sbjct 169834 TTACAACGTGGAGAACCCATTCGACTTCATGGAACACATTTCTCTGGAAGGAAAGACGAA 169775
Query 22905 TTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATG 22950
|||||||||||| | |||||| |||||||| || || || || |||
Sbjct 169774 TTTCTTCGAAAAGAAAGTTGGCGAATACCAGAAGGCCGGAGTCATG 169729
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302576117808356
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |