Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1095 109 4e-19 seq1320 93.3 3e-14 >seq1095 Length=312686 Score = 109 bits (120), Expect = 4e-19 Identities = 165/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || | |||||| |||| || || ||||||||||| || ||||||||||| | | Sbjct 84693 CCTCCACGCAACCTCAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 84634 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || | ||||| | || || || ||| | || || | ||| ||||| || Sbjct 84633 AGGGTTCTGCCATCCTCGAGCTGCTTTCCGGCAAAGATGAGTCTCTGCTGGTCGGGTGGA 84574 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || || || ||| || | | | ||||| |||||| Sbjct 84573 ATTCCCTCCTTGTCTTGGATCTTGGC--CTTTACATTCTCAATCGTGTCCGACGGCTCCA 84516 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 |||| || || || || ||||||| |||||| ||||| |||||||||||| Sbjct 84515 CCTCCAACGTAATTGTCTTGCCGGTCAACGTTTTCACAAAGATCTGCATTTTG 84463 Score = 107 bits (118), Expect = 2e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || || || |||| || || || || || ||||| ||||||||||| | | Sbjct 90688 CCACCACGAAGTCTGAGAACCAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAGTCAGAC 90629 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | | ||||||| ||| || || || | ||||| | ||| ||||| || Sbjct 90628 AGGGTTCTACCATCCTCCAGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTGGA 90569 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || || || |||||| | | | || ||| ||||||| Sbjct 90568 ATTCCCTCCTTGTCTTGGATCTTGGC--CTTCACGTTTTCAATGGTATCGGAGGGCTCCA 90511 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||||| ||||||||| || |||||||| || || ||||| || |||||| Sbjct 90510 CTTCCAAGGTGATGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCATT 90461 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || || || || || || ||||||||||| | | Sbjct 89092 CCTCCACGAAGACGCAACACAAGGTGGAGAGTAGATTCTTTCTGGATGTTGTAGTCAGAC 89033 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | ||||||| || || || || |||| || ||||| ||||| || Sbjct 89032 AGTGTCCTTCCATCCTCCAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGGTCGGGTGGG 88973 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| ||| | |||||| | | | ||||| ||| || | Sbjct 88972 ATTCCCTCCTTGTCTTGAATCTTAGCCTTCACGTTCTCAATCGTGTCAGAGGGTTCAACT 88913 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| ||||||||||| |||||||| ||||| || || || |||||| Sbjct 88912 TCCAATGTGATGGTTTTGCCGGTCAGAGTTTTTACGAAGATTTGCATT 88865 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || ||||| || || || ||||||||||| | Sbjct 89320 CCTCCACGAAGACGCAACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGAT 89261 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | || |||| || || || || | ||||| ||||| || || ||| Sbjct 89260 AGTGTTCTGCCATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGA 89201 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || || ||||| ||| | ||| || | | | |||||| ||||| | Sbjct 89200 ATACCTTCCTTGTCTTGAATCTTAGCCTTGACATTCTCGATAGTGTCTGATGGCTCTACT 89141 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| ||||||||| || |||||||| || || ||||| || |||||| Sbjct 89140 TCCAGGGTGATGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCATT 89093 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || ||||| || || || ||||||||||| | Sbjct 89548 CCTCCACGAAGACGCAACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGAT 89489 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | || |||| || || || || | ||||| ||||| || || ||| Sbjct 89488 AGTGTTCTGCCATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGA 89429 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || || ||||| ||| | ||| || | | | |||||| ||||| | Sbjct 89428 ATACCTTCCTTGTCTTGAATCTTAGCCTTGACATTCTCGATAGTGTCTGATGGCTCTACT 89369 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| ||||||||| || |||||||| || || ||||| || |||||| Sbjct 89368 TCCAGGGTGATGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCATT 89321 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || ||||| || || || ||||||||||| | Sbjct 89776 CCTCCACGAAGACGCAACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGAT 89717 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | || |||| || || || || | ||||| ||||| || || ||| Sbjct 89716 AGTGTTCTGCCATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGA 89657 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || || ||||| ||| | ||| || | | | |||||| ||||| | Sbjct 89656 ATACCTTCCTTGTCTTGAATCTTAGCCTTGACATTCTCGATAGTGTCTGATGGCTCTACT 89597 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| ||||||||| || |||||||| || || ||||| || |||||| Sbjct 89596 TCCAGGGTGATGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCATT 89549 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || ||||| || || || ||||||||||| | Sbjct 90004 CCTCCACGAAGACGCAACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGAT 89945 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | || |||| || || || || | ||||| ||||| || || ||| Sbjct 89944 AGTGTTCTGCCATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGA 89885 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || || ||||| ||| | ||| || | | | |||||| ||||| | Sbjct 89884 ATACCTTCCTTGTCTTGAATCTTAGCCTTGACATTCTCGATAGTGTCTGATGGCTCTACT 89825 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| ||||||||| || |||||||| || || ||||| || |||||| Sbjct 89824 TCCAGGGTGATGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCATT 89777 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || ||||| || || || ||||||||||| | Sbjct 90232 CCTCCACGAAGACGCAACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGAT 90173 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | || |||| || || || || | ||||| ||||| || || ||| Sbjct 90172 AGTGTTCTGCCATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGA 90113 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || || ||||| ||| | ||| || | | | |||||| ||||| | Sbjct 90112 ATACCTTCCTTGTCTTGAATCTTAGCCTTGACATTCTCGATAGTGTCTGATGGCTCTACT 90053 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| ||||||||| || |||||||| || || ||||| || |||||| Sbjct 90052 TCCAGGGTGATGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCATT 90005 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || ||||| || || || ||||||||||| | Sbjct 90460 CCTCCACGAAGACGCAACACAAGGTGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGAT 90401 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | || |||| || || || || | ||||| ||||| || || ||| Sbjct 90400 AGTGTTCTGCCATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGA 90341 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || || ||||| ||| | ||| || | | | |||||| ||||| | Sbjct 90340 ATACCTTCCTTGTCTTGAATCTTAGCCTTGACATTCTCGATAGTGTCTGATGGCTCTACT 90281 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| ||||||||| || |||||||| || || ||||| || |||||| Sbjct 90280 TCCAGGGTGATGGTCTTGCCGGTCAGAGTCTTTACAAAGATTTGCATT 90233 >seq1320 Length=267419 Score = 93.3 bits (102), Expect = 3e-14 Identities = 164/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | ||||| | ||| || || || ||||| || || || ||||||| | Sbjct 95657 CCTCCTCTAAGACGGAGTACGAGATGGAGAGTTGATTCCTTCTGGATATTATAGTCGGAC 95598 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || |||| ||||| || || || || | || || ||||| ||||| || Sbjct 95597 AGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTGGA 95538 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| || || |||| | |||||| | | | ||||| ||||| | Sbjct 95537 ATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGAAGGCTCGACT 95478 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTAGCCTTA 16947 || | |||||||| || || ||||| ||||| ||||||||||||||||| | ||||| Sbjct 95477 TCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAAATCTGCATTTTTAATCCTTA 95419 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| ||| || ||||||||||| || || || ||||||| | Sbjct 96569 CCACCACGGAGACGCAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTATAGTCGGAC 96510 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || |||| ||||| || || || || | || || ||||| ||||| || Sbjct 96509 AGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTGGA 96450 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| || || |||| | |||||| | | | ||||| ||||| | Sbjct 96449 ATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGATGGCTCGACT 96390 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | |||||||| || || ||||| || || || |||||||||||| Sbjct 96389 TCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCATT 96342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404858142688420