Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq738 266 4e-66 seq293 102 1e-16 seq412 89.7 7e-13 >seq738 Length=407637 Score = 266 bits (294), Expect = 4e-66 Identities = 588/876 (67%), Gaps = 12/876 (1%) Strand=Plus/Plus Query 32369 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATT 32428 |||||| ||||||| ||| | ||||| || ||||| || ||| ||||| ||||| Sbjct 114299 TTTTTGATATTCACTCACCCTCTTTTCAAAGAAATTTGTCTTATTAATCAATGAAATATT 114358 Query 32429 TTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 32488 ||||||||||| || ||||| |||||| ||||| ||| | |||| | |||| | Sbjct 114359 ATCCATGAAATCCAAAGGATTATGAACATTGTAAATCTTTGAATATCCAAGTTCAATTAA 114418 Query 32489 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 32548 |||||||| || |||||| |||||| | |||| | ||||||| |||| || Sbjct 114419 TAATCTATCAGCAACAAATCTTATATAATTAATCATAGATGAGCAATTCAAACCTAAAAT 114478 Query 32549 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 32608 || ||| || | | | | || ||||||||| ||||||| || || || ||| || Sbjct 114479 TTCAACGGGTAATGACTCTGTCAGAAATTCTCCTTCAATATCAACTGCTTCCTGTATTAT 114538 Query 32609 AGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTT---TAAACATCAAACATGC 32665 || || || ||| | || ||||| || || | | | |||||| Sbjct 114539 TGAATAAACCTTTGAATCAGATAATTTATGTTTTAAATATTTCCTATATAAGAGACATGC 114598 Query 32666 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 32725 || || || |||| |||| |||||||| || | ||| || || || | || || Sbjct 114599 AAATTCACAATGTAAGGCCTCATCTCTACTTATAAGTTCATTACTGAAAGTTAAACCTGG 114658 Query 32726 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 32785 ||| | ||||||||| | ||||||||| | ||||| ||||| |||||||| || Sbjct 114659 CATAATATTACGCTTTTTCAACCAAAATATTGCTGCAAAACTCCCAGAGAAGAAAATCCC 114718 Query 32786 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT---GTCATGTATCCA 32842 ||| || | ||||| || | | || |||| | ||| | | |||| ||| | Sbjct 114719 TTCAACCACTGCAAACGCTACCAATCGCTCTGCGAAACTTGAATTTTGATCATATATATA 114778 Query 32843 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 32902 || | ||||| |||| ||| ||| |||| || |||||||| || ||||| || Sbjct 114779 TTTATTTGCCCATATTCCCTTTTTTCTTATTGAAGGGATGGTCTCTATTGCGTTAAAAAG 114838 Query 32903 ATAGtttttttCATTACTATCTTTAACATATGTATC-AATCAAAAGACTATACATTTCCG 32961 || || || | || || || | | || || ||| | ||| |||||||| || | Sbjct 114839 ATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAATAATAAG-CTATACATCTCTG 114897 Query 32962 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTA 33021 |||| || ||||| || | | |||||| | |||||| ||||||| || | || |||| Sbjct 114898 AATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGCTTCAATGATTTGTA 114957 Query 33022 CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG--GCTGCAAA 33079 ||||| | |||| ||| ||||| ||| || ||| || ||| | ||||| Sbjct 114958 CTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATT--GTATCTGATGAAGCAAA 115015 Query 33080 AAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATT 33139 ||| || | | |||| |||||||| |||||| |||| ||| || || ||||||| | | Sbjct 115016 AAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTTCTTCCAATGAGT 115075 Query 33140 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 33199 ||||| ||||||| ||| || ||||| |||||||| ||||| | | | |||||| Sbjct 115076 AATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAAAAAGATGCTACAGATTGTTTATA 115135 Query 33200 CATATTCCAGATGTCATGATATTGAATTGGAAAAAT 33235 | | | ||| || || | ||| |||||||| || Sbjct 115136 CTTGTACCATATATCGGGGTATAATATTGGAAATAT 115171 Score = 154 bits (170), Expect = 2e-32 Identities = 793/1249 (63%), Gaps = 52/1249 (4%) Strand=Plus/Plus Query 62441 TATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTA---ATGCACCGTAATAAATG 62497 ||| |||| || || ||| |||||||| || || || | ||||| ||||| | Sbjct 383409 TATTGTCCATCATTTCTAGCAAGTTCACAGCTTGCTTCAAGAGATGCA---TAATAGAGA 383465 Query 62498 GTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAG 62557 ||||| || || |||||||| | | | ||| || || |||| ||||| Sbjct 383466 GTTTCAAATATTTTCTTATTCAATTGGATAGATTCTTCACTGCCATATGGTATTTTTAAA 383525 Query 62558 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62617 | || || || ||||| || |||| || || || |||||||||| | | ||||| Sbjct 383526 ATCATGAATAGATCAGCTAAACCCTGAATTCCGATCCCAATAGGTCTATTTTTTTTATTT 383585 Query 62618 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 62677 || | ||| | |||| || | ||||||||| ||||| || | |||||| |||||| Sbjct 383586 GAAAATTCTGTAGCTGGGATTGTATAATAATTCATATCGATTAATTTATTTAGATTTTGT 383645 Query 62678 ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTAT------T 62731 || ||||| || | ||| ||| |||||||||| ||| | | Sbjct 383646 GTAACAACTTTTGTAACCTGTCTCAATTTATAAAAATCAAATACATTATCATTGGGAACT 383705 Query 62732 ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCAT--TAGCATCCG 62789 | ||| | || | ||| | || || |||||||| || || | |||| | || | Sbjct 383706 ATAAATTTATTAACTGCTATGGAAGCAAGATTACAGACTGCAATTTCATCTTTTGAT--G 383763 Query 62790 CATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGAT 62849 | |||||| || ||||| || | ||||| || || |||||||| ||||| ||| | Sbjct 383764 AAAATTGTACAATTTCAGTACATAAGTTACTGCATTTTATGGTTCCCAAATTAATTTGGT 383823 Query 62850 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTA--CCAGTTTCAATCTG 62907 || |||| | ||| ||||||| | | || || | ||| ||||||||||| || Sbjct 383824 TAGACTTTCTATTAATACTATCCTTAAATAACAT--ATAGGGTAATCCAGTTTCAATTTG 383881 Query 62908 AGATTCTATAATCGCTTTCCAGACGA---CTCGAGCCTTTATTATAGATTTGTATCTCTT 62964 | || || || |||| || | ||| || | |||| |||||||| Sbjct 383882 ACTATCAATTAT---TTTCATGAACAATTCTCTTGCATCTATTTGTTCCAAATATCTCTT 383938 Query 62965 TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCC 63024 |||| ||| ||| || ||| | | ||| ||||| | |||||||| | || Sbjct 383939 TTCTTGTTCATATTGTCCATATAGTAATTCAAACTCATTACCCCAAACGTCTGATAGATT 383998 Query 63025 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63084 ||||||| || |||||||| || ||| | | | || | ||| | |||||| Sbjct 383999 TGGACATTGATTTGGACACATTAAACTCCAAATTTCATTATTTTCCACCCTAGACATAAA 384058 Query 63085 GAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG 63143 ||||||| | ||||||| | ||| |||| |||||| | |||| |||| || || || Sbjct 384059 TAGATCAGACAACCAAAGA-CCATAGAATAAATCTCTTGCTCTAAGTTCATCATTGCCAA 384117 Query 63144 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 63203 |||| ||||| | || | || || ||||||| |||||| | || || || || | Sbjct 384118 TATTTTTTTTCAAATTCAAAAATTTCAAAATATCAATATGCCATGACTCTAAATAGATTG 384177 Query 63204 CCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 63263 | || | || || || || ||||||||||| | |||| | | | ||||| | | Sbjct 384178 CAATGGCCCCTGGTCG---CTTCCCTCCCTGATCAACCAATCTCACAGAGCTATTAAATA 384234 Query 63264 CTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCAC 63323 | | | | ||| | |||||| || ||| || | | | || | | | Sbjct 384235 AACGAATTGTAGAAATTAGACCATTTGA--AACCCCAGG---ATAAATTTTATCATTATC 384289 Query 63324 TG--GCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 63381 || || ||| | | | || ||| ||||| || ||| ||||| ||||| || Sbjct 384290 TGTTGCTTTGATACAATGTAAAGCTAAACCAATTCCACCCATCATATTAGATATTAAAGC 384349 Query 63382 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA---TCCATCATGTTAAGTAG 63438 || ||| | |||||||| || || || |||| |||| | ||||| || Sbjct 384350 ACAATTTTTGAGTGTATCATAAATATTGTCAATTGAATCACTTTCCA--AAGTTAA-TAA 384406 Query 63439 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 63498 |||||| || | || ||| || | ||| | ||||| | || ||||||| || || Sbjct 384407 AAAACAACTTGCCAATTGCTGCTGTGGAGTACATGCATTTATTAGTGTAGGAGTTGCATG 384466 Query 63499 AGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATA----TCCC 63554 ||| | |||||| || || |||| || || || | | ||| ||| | || Sbjct 384467 AGTGTAATATTTTTGTGATAGAAGATCATAGGTTTCTCTTATTTTGTCAATATTGTTACC 384526 Query 63555 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 63614 ||| || | ||| | || | ||| ||||| || ||||||||||||| || | Sbjct 384527 ATT----TATACTTACCGATACTCTCATAAACATATGTTGAGGTCTTTCAATAATAACAT 384582 Query 63615 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 63663 | | ||||||| | ||| ||| |||| || |||||| | |||||||| Sbjct 384583 TATCAATTTTCATTAGGTATGATGTTTCTAATGTTTTATATCCAAAATA 384631 >seq293 Length=664131 Score = 102 bits (112), Expect = 1e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869 ||||||| ||||| || ||||||||||||| || || || || || | |||||| || | Sbjct 211508 CACTAAACAGTTTCTTAGTTTCTTTGTGTAAGTTGGAGACTGCAATGCGAGCGGCCAGGA 211567 Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929 | |||||||| ||||| | || || |||||| || ||||||| |||| | | |||| Sbjct 211568 TTGCATAATCGGGATGACGAGTGGTTAGAGTGGCAGCAGTTTCGGCCGCCAAATTATCCA 211627 Query 63930 ATTCTACCGTTGTTACACC 63948 ||| || ||||| ||||| Sbjct 211628 GTTCAACAGTTGTCACACC 211646 >seq412 Length=567167 Score = 89.7 bits (98), Expect = 7e-13 Identities = 129/182 (71%), Gaps = 9/182 (5%) Strand=Plus/Plus Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || ||||| || ||||| || |||||||| |||||||| |||||||||||||| || Sbjct 173441 AAGGTGAGACCAGGCATGAGACCACGCTTCTTAAGCCAGAATATGGACGCAAAGCTGCCC 173500 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC---- 32827 || ||||| || || || || || || || || | || || ||| || | ||| Sbjct 173501 GAGAAGAAGATGCCCTCAACGGCGGCGAACGCCACAACTCGCTCGCCGAACGTGGCCGTT 173560 Query 32828 --GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTC 32885 |||| | ||||||| ||||| || |||||| | || ||||| ||||||||| Sbjct 173561 TGGCTGGC---GATCCACTGCAACGCCCAGTCCGCCTTCCTCTTAACACACGGCATTGTC 173617 Query 32886 TC 32887 || Sbjct 173618 TC 173619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633263242016800