Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq738 266 4e-66
seq293 102 1e-16
seq412 89.7 7e-13
>seq738
Length=407637
Score = 266 bits (294), Expect = 4e-66
Identities = 588/876 (67%), Gaps = 12/876 (1%)
Strand=Plus/Plus
Query 32369 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATT 32428
|||||| ||||||| ||| | ||||| || ||||| || ||| ||||| |||||
Sbjct 114299 TTTTTGATATTCACTCACCCTCTTTTCAAAGAAATTTGTCTTATTAATCAATGAAATATT 114358
Query 32429 TTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 32488
||||||||||| || ||||| |||||| ||||| ||| | |||| | |||| |
Sbjct 114359 ATCCATGAAATCCAAAGGATTATGAACATTGTAAATCTTTGAATATCCAAGTTCAATTAA 114418
Query 32489 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 32548
|||||||| || |||||| |||||| | |||| | ||||||| |||| ||
Sbjct 114419 TAATCTATCAGCAACAAATCTTATATAATTAATCATAGATGAGCAATTCAAACCTAAAAT 114478
Query 32549 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 32608
|| ||| || | | | | || ||||||||| ||||||| || || || ||| ||
Sbjct 114479 TTCAACGGGTAATGACTCTGTCAGAAATTCTCCTTCAATATCAACTGCTTCCTGTATTAT 114538
Query 32609 AGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTT---TAAACATCAAACATGC 32665
|| || || ||| | || ||||| || || | | | ||||||
Sbjct 114539 TGAATAAACCTTTGAATCAGATAATTTATGTTTTAAATATTTCCTATATAAGAGACATGC 114598
Query 32666 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 32725
|| || || |||| |||| |||||||| || | ||| || || || | || ||
Sbjct 114599 AAATTCACAATGTAAGGCCTCATCTCTACTTATAAGTTCATTACTGAAAGTTAAACCTGG 114658
Query 32726 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 32785
||| | ||||||||| | ||||||||| | ||||| ||||| |||||||| ||
Sbjct 114659 CATAATATTACGCTTTTTCAACCAAAATATTGCTGCAAAACTCCCAGAGAAGAAAATCCC 114718
Query 32786 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT---GTCATGTATCCA 32842
||| || | ||||| || | | || |||| | ||| | | |||| ||| |
Sbjct 114719 TTCAACCACTGCAAACGCTACCAATCGCTCTGCGAAACTTGAATTTTGATCATATATATA 114778
Query 32843 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 32902
|| | ||||| |||| ||| ||| |||| || |||||||| || ||||| ||
Sbjct 114779 TTTATTTGCCCATATTCCCTTTTTTCTTATTGAAGGGATGGTCTCTATTGCGTTAAAAAG 114838
Query 32903 ATAGtttttttCATTACTATCTTTAACATATGTATC-AATCAAAAGACTATACATTTCCG 32961
|| || || | || || || | | || || ||| | ||| |||||||| || |
Sbjct 114839 ATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAATAATAAG-CTATACATCTCTG 114897
Query 32962 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTA 33021
|||| || ||||| || | | |||||| | |||||| ||||||| || | || ||||
Sbjct 114898 AATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGCTTCAATGATTTGTA 114957
Query 33022 CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG--GCTGCAAA 33079
||||| | |||| ||| ||||| ||| || ||| || ||| | |||||
Sbjct 114958 CTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATT--GTATCTGATGAAGCAAA 115015
Query 33080 AAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATT 33139
||| || | | |||| |||||||| |||||| |||| ||| || || ||||||| | |
Sbjct 115016 AAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTTCTTCCAATGAGT 115075
Query 33140 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 33199
||||| ||||||| ||| || ||||| |||||||| ||||| | | | ||||||
Sbjct 115076 AATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAAAAAGATGCTACAGATTGTTTATA 115135
Query 33200 CATATTCCAGATGTCATGATATTGAATTGGAAAAAT 33235
| | | ||| || || | ||| |||||||| ||
Sbjct 115136 CTTGTACCATATATCGGGGTATAATATTGGAAATAT 115171
Score = 154 bits (170), Expect = 2e-32
Identities = 793/1249 (63%), Gaps = 52/1249 (4%)
Strand=Plus/Plus
Query 62441 TATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTA---ATGCACCGTAATAAATG 62497
||| |||| || || ||| |||||||| || || || | ||||| ||||| |
Sbjct 383409 TATTGTCCATCATTTCTAGCAAGTTCACAGCTTGCTTCAAGAGATGCA---TAATAGAGA 383465
Query 62498 GTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAG 62557
||||| || || |||||||| | | | ||| || || |||| |||||
Sbjct 383466 GTTTCAAATATTTTCTTATTCAATTGGATAGATTCTTCACTGCCATATGGTATTTTTAAA 383525
Query 62558 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62617
| || || || ||||| || |||| || || || |||||||||| | | |||||
Sbjct 383526 ATCATGAATAGATCAGCTAAACCCTGAATTCCGATCCCAATAGGTCTATTTTTTTTATTT 383585
Query 62618 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 62677
|| | ||| | |||| || | ||||||||| ||||| || | |||||| ||||||
Sbjct 383586 GAAAATTCTGTAGCTGGGATTGTATAATAATTCATATCGATTAATTTATTTAGATTTTGT 383645
Query 62678 ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTAT------T 62731
|| ||||| || | ||| ||| |||||||||| ||| | |
Sbjct 383646 GTAACAACTTTTGTAACCTGTCTCAATTTATAAAAATCAAATACATTATCATTGGGAACT 383705
Query 62732 ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCAT--TAGCATCCG 62789
| ||| | || | ||| | || || |||||||| || || | |||| | || |
Sbjct 383706 ATAAATTTATTAACTGCTATGGAAGCAAGATTACAGACTGCAATTTCATCTTTTGAT--G 383763
Query 62790 CATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGAT 62849
| |||||| || ||||| || | ||||| || || |||||||| ||||| ||| |
Sbjct 383764 AAAATTGTACAATTTCAGTACATAAGTTACTGCATTTTATGGTTCCCAAATTAATTTGGT 383823
Query 62850 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTA--CCAGTTTCAATCTG 62907
|| |||| | ||| ||||||| | | || || | ||| ||||||||||| ||
Sbjct 383824 TAGACTTTCTATTAATACTATCCTTAAATAACAT--ATAGGGTAATCCAGTTTCAATTTG 383881
Query 62908 AGATTCTATAATCGCTTTCCAGACGA---CTCGAGCCTTTATTATAGATTTGTATCTCTT 62964
| || || || |||| || | ||| || | |||| ||||||||
Sbjct 383882 ACTATCAATTAT---TTTCATGAACAATTCTCTTGCATCTATTTGTTCCAAATATCTCTT 383938
Query 62965 TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCC 63024
|||| ||| ||| || ||| | | ||| ||||| | |||||||| | ||
Sbjct 383939 TTCTTGTTCATATTGTCCATATAGTAATTCAAACTCATTACCCCAAACGTCTGATAGATT 383998
Query 63025 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63084
||||||| || |||||||| || ||| | | | || | ||| | ||||||
Sbjct 383999 TGGACATTGATTTGGACACATTAAACTCCAAATTTCATTATTTTCCACCCTAGACATAAA 384058
Query 63085 GAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG 63143
||||||| | ||||||| | ||| |||| |||||| | |||| |||| || || ||
Sbjct 384059 TAGATCAGACAACCAAAGA-CCATAGAATAAATCTCTTGCTCTAAGTTCATCATTGCCAA 384117
Query 63144 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 63203
|||| ||||| | || | || || ||||||| |||||| | || || || || |
Sbjct 384118 TATTTTTTTTCAAATTCAAAAATTTCAAAATATCAATATGCCATGACTCTAAATAGATTG 384177
Query 63204 CCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 63263
| || | || || || || ||||||||||| | |||| | | | ||||| | |
Sbjct 384178 CAATGGCCCCTGGTCG---CTTCCCTCCCTGATCAACCAATCTCACAGAGCTATTAAATA 384234
Query 63264 CTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCAC 63323
| | | | ||| | |||||| || ||| || | | | || | | |
Sbjct 384235 AACGAATTGTAGAAATTAGACCATTTGA--AACCCCAGG---ATAAATTTTATCATTATC 384289
Query 63324 TG--GCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 63381
|| || ||| | | | || ||| ||||| || ||| ||||| ||||| ||
Sbjct 384290 TGTTGCTTTGATACAATGTAAAGCTAAACCAATTCCACCCATCATATTAGATATTAAAGC 384349
Query 63382 GCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA---TCCATCATGTTAAGTAG 63438
|| ||| | |||||||| || || || |||| |||| | ||||| ||
Sbjct 384350 ACAATTTTTGAGTGTATCATAAATATTGTCAATTGAATCACTTTCCA--AAGTTAA-TAA 384406
Query 63439 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 63498
|||||| || | || ||| || | ||| | ||||| | || ||||||| || ||
Sbjct 384407 AAAACAACTTGCCAATTGCTGCTGTGGAGTACATGCATTTATTAGTGTAGGAGTTGCATG 384466
Query 63499 AGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATA----TCCC 63554
||| | |||||| || || |||| || || || | | ||| ||| | ||
Sbjct 384467 AGTGTAATATTTTTGTGATAGAAGATCATAGGTTTCTCTTATTTTGTCAATATTGTTACC 384526
Query 63555 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 63614
||| || | ||| | || | ||| ||||| || ||||||||||||| || |
Sbjct 384527 ATT----TATACTTACCGATACTCTCATAAACATATGTTGAGGTCTTTCAATAATAACAT 384582
Query 63615 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 63663
| | ||||||| | ||| ||| |||| || |||||| | ||||||||
Sbjct 384583 TATCAATTTTCATTAGGTATGATGTTTCTAATGTTTTATATCCAAAATA 384631
>seq293
Length=664131
Score = 102 bits (112), Expect = 1e-16
Identities = 106/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869
||||||| ||||| || ||||||||||||| || || || || || | |||||| || |
Sbjct 211508 CACTAAACAGTTTCTTAGTTTCTTTGTGTAAGTTGGAGACTGCAATGCGAGCGGCCAGGA 211567
Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929
| |||||||| ||||| | || || |||||| || ||||||| |||| | | ||||
Sbjct 211568 TTGCATAATCGGGATGACGAGTGGTTAGAGTGGCAGCAGTTTCGGCCGCCAAATTATCCA 211627
Query 63930 ATTCTACCGTTGTTACACC 63948
||| || ||||| |||||
Sbjct 211628 GTTCAACAGTTGTCACACC 211646
>seq412
Length=567167
Score = 89.7 bits (98), Expect = 7e-13
Identities = 129/182 (71%), Gaps = 9/182 (5%)
Strand=Plus/Plus
Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771
|| ||||| || ||||| || |||||||| |||||||| |||||||||||||| ||
Sbjct 173441 AAGGTGAGACCAGGCATGAGACCACGCTTCTTAAGCCAGAATATGGACGCAAAGCTGCCC 173500
Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC---- 32827
|| ||||| || || || || || || || || | || || ||| || | |||
Sbjct 173501 GAGAAGAAGATGCCCTCAACGGCGGCGAACGCCACAACTCGCTCGCCGAACGTGGCCGTT 173560
Query 32828 --GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTC 32885
|||| | ||||||| ||||| || |||||| | || ||||| |||||||||
Sbjct 173561 TGGCTGGC---GATCCACTGCAACGCCCAGTCCGCCTTCCTCTTAACACACGGCATTGTC 173617
Query 32886 TC 32887
||
Sbjct 173618 TC 173619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633263242016800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |