Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq1095 98.7 8e-16
>seq1095
Length=312686
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||| |||||||||||||| |||| || |||||||| ||| ||||| |||||
Sbjct 81817 ATGCAGATTTTTGTCAAAACCTTGACTGGAAAAACCATCACCCTGGAAGTTGAACCTTCA 81876
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
||| || ||| | || || || || || || ||||| |||| ||| ||
Sbjct 81877 GATACTATTGAGAATGTCAAGGCTAAGATCCAAGATAAGGAAGGAATTCCACCCGACCAG 81936
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
|| || ||||| | || || || ||| |||||||| || ||| | | || || |||
Sbjct 81937 CAGAGACTTATCTTCGCTGGAAAGCAACTGGAAGATGGTAGAACACTATCAGACTACAAT 81996
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| || || ||||||||||| || || ||| |||| || || || ||
Sbjct 81997 ATTCAGAAGGAATCTACACTTCACTTGGTGCTGCGACTCCGTGGAGG 82043
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||| |||||||||||||| |||| || |||||||| ||| ||||| |||||
Sbjct 88638 ATGCAGATTTTTGTCAAAACCTTGACTGGAAAAACCATCACCCTGGAAGTTGAACCTTCA 88697
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
||| || ||| | || || || || || || ||||| |||| ||| ||
Sbjct 88698 GATACTATTGAGAATGTCAAGGCTAAGATCCAAGATAAGGAAGGAATTCCACCCGACCAG 88757
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
|| || ||||| | || || || ||| |||||||| || ||| | | || || |||
Sbjct 88758 CAGAGACTTATCTTCGCTGGAAAGCAACTGGAAGATGGTAGAACACTATCAGACTACAAT 88817
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| || || ||||||||||| || || ||| |||| || || || ||
Sbjct 88818 ATTCAGAAGGAATCTACACTTCACTTGGTGCTGCGACTCCGTGGAGG 88864
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245
||||||||| ||||| || || |||||||||| ||||| ||| ||||| ||| |||
Sbjct 90461 AATGCAAATCTTTGTAAAGACTCTGACCGGCAAGACCATCACCTTGGAAGTGGAGCCCTC 90520
Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305
|||| | ||| | || || || || ||||| || || |||| ||| ||
Sbjct 90521 CGATACCATTGAAAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATTCCACCCGACCA 90580
Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365
|| || ||||| | || || || ||| |||| ||| || ||| || | || || ||
Sbjct 90581 GCAGAGACTTATCTTCGCTGGAAAGCAACTGGAGGATGGTAGAACCCTGTCTGACTACAA 90640
Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| ||||||||||||||||| || || || | | || || |||||
Sbjct 90641 CATCCAAAAAGAATCTACACTCCACTTGGTTCTCAGACTTCGTGGTGG 90688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422799956263600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |