Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_008953.1
Length=3935
Score E
Sequences producing significant alignments: (Bits) Value
seq1200 104 6e-19
seq183 80.6 7e-12
>seq1200
Length=288961
Score = 104 bits (114), Expect = 6e-19
Identities = 99/127 (78%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426
|| || || ||||| |||||||| ||||||||| | | || |||| ||||||||||
Sbjct 212531 TGCACGTTCCACAAGTACGGTCCCTCGGGCTCCATCCAGAAGCACGACTCACTCTGCATC 212590
Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTG 3486
|| ||| |||| | ||||||||||||| ||||| ||| |||||||||||||| | |
Sbjct 212591 CTGCCGCTGAACATCGTCAACGAGAAGACTTACATCTTCATCTGGTTCTGGTTCATCATC 212650
Query 3487 CTAGCCA 3493
|| ||||
Sbjct 212651 CTGGCCA 212657
>seq183
Length=787208
Score = 80.6 bits (88), Expect = 7e-12
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 3419 TCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGT 3478
||||||| |||||| ||||| |||||||||||||||||||| ||||| ||||||||||
Sbjct 66217 TCTGCATTCTCCCGCTCAACGTCGTCAACGAGAAGATCTACATCTTCCTATGGTTCTGGT 66158
Query 3479 TC 3480
||
Sbjct 66157 TC 66156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12473644833000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |