Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq1200 104 6e-19 seq183 80.6 7e-12 >seq1200 Length=288961 Score = 104 bits (114), Expect = 6e-19 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426 || || || ||||| |||||||| ||||||||| | | || |||| |||||||||| Sbjct 212531 TGCACGTTCCACAAGTACGGTCCCTCGGGCTCCATCCAGAAGCACGACTCACTCTGCATC 212590 Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTG 3486 || ||| |||| | ||||||||||||| ||||| ||| |||||||||||||| | | Sbjct 212591 CTGCCGCTGAACATCGTCAACGAGAAGACTTACATCTTCATCTGGTTCTGGTTCATCATC 212650 Query 3487 CTAGCCA 3493 || |||| Sbjct 212651 CTGGCCA 212657 >seq183 Length=787208 Score = 80.6 bits (88), Expect = 7e-12 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 3419 TCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGT 3478 ||||||| |||||| ||||| |||||||||||||||||||| ||||| |||||||||| Sbjct 66217 TCTGCATTCTCCCGCTCAACGTCGTCAACGAGAAGATCTACATCTTCCTATGGTTCTGGT 66158 Query 3479 TC 3480 || Sbjct 66157 TC 66156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12473644833000