Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq412 89.7 6e-13
seq649 86.0 7e-12
>seq412
Length=567167
Score = 89.7 bits (98), Expect = 6e-13
Identities = 154/218 (71%), Gaps = 8/218 (4%)
Strand=Plus/Plus
Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125
|||| || || || || || ||||| |||| || || ||||||||||| |||||||
Sbjct 173412 CCTCATCGCGCGAAATAAGCTCATTGCTGAAGGTGAGACCAGGCATGAGACCACGCTTCT 173471
Query 126126 TCAACCAGAAAATCG-CACAAA-ATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAA 126183
| | |||||| || | | |||| || |||||||||||||| ||||| || |||||
Sbjct 173472 TAAGCCAGAATATGGACGCAAAGCTG--CCCGAGAAGAAGATGCCCTCAACGGCGGCGAA 173529
Query 126184 CGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTG--TGTCAAACCACTTCATCGCCCAC 126241
||| | | ||||| | || | | || |||| || | | ||||| || ||||||
Sbjct 173530 CGCCACAACTCGCTCGCCGAACGTGGCCG--TTTGGCTGGCGATCCACTGCAACGCCCAG 173587
Query 126242 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279
| |||||| ||| | |||||| | |||| | ||||
Sbjct 173588 TCCGCCTTCCTCTTAACACACGGCATTGTCTCGGTCGC 173625
>seq649
Length=437485
Score = 86.0 bits (94), Expect = 7e-12
Identities = 152/220 (69%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 171873 TGAGTTTTGTGAAGATGTACCTCGT--TTGAGACGCATCTTTGCCACCCATGAGACGCGT 171930
|||| | ||||||||||| | || ||| | || || ||||| ||| || |||||
Sbjct 394667 TGAGCATGGTGAAGATGTAACGCGGACTTGCGGCG--TCCTTGCCGCCCTGCAGTCGCGT 394610
Query 171931 CCCAAATTGACCACACGGTTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGC 171990
|| || ||||| ||| | | || ||||| ||||| |||| ||||| | ||
Sbjct 394609 GCCGAACTGACCGAGCGGCTGCAACAGGTTGATGTTGTTGCTGCCCACGTAGTTTTGCGC 394550
Query 171991 CAACTTGACAATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGC 172050
|| |||| || || | || || || |||||||| ||||||||||||| || ||
Sbjct 394549 CAGGTTGATGATGGTCGACATCAGTGACACCTCACCGTGGTGGTAGGCCGACTGCTCGGC 394490
Query 172051 GACATACGCCGCCAACTGTGCCACCTTCATCTCATCCTTG 172090
|| || | |||| ||| |||||||| |||||| ||||
Sbjct 394489 CACCGACCCGGCCAGCTGGGCCACCTTGATCTCACGCTTG 394450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597005955138640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |