Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_011291.1 Length=47057 Score E Sequences producing significant alignments: (Bits) Value seq6496 98.7 3e-16 >seq6496 Length=10970 Score = 98.7 bits (108), Expect = 3e-16 Identities = 160/228 (70%), Gaps = 8/228 (4%) Strand=Plus/Minus Query 11678 AGGAGGCGTTCGACCTGATCGTCGCGGCCACCCAGAACGGCCTGAACATCTCCAACGATC 11737 ||||||| ||||| | ||| ||| ||| ||| |||||| ||||| || | |||| Sbjct 10556 AGGAGGCCTTCGATATCCTCGCCGCCGCCGCCCGCAACGGCGTGAACCGGGCCGAGGATC 10497 Query 11738 TGCTCGACACGTTCGAGGAATACGGCACCAAGTTCCGCGACCTTGGCATCACCGGCCAAG 11797 | |||||||| ||| ||| ||| | | ||||| | || || || ||| || Sbjct 10496 TCCTCGACACATTCACGGAGTACCCGGTCGTGCTCCGCAAGCTCGGTCTCGACGGGCAGC 10437 Query 11798 AGGCCCTCGGCCTGATCAACCAGATGTGGG---AGGGC-GGTGCCCGCAACGTCGATGTC 11853 || |||||||| |||||||| ||| | ||| || || |||||| ||| ||| Sbjct 10436 AGATGCTCGGCCTCCTCAACCAG----GGGCTCACGGCAGGGGCGCGCAACAGCGACGTC 10381 Query 11854 GCCGCCGACGCGCTCAAAGAGTTCGCGATCTCGGTGACCGACTCGTCG 11901 | ||||||||||||||| |||||| |||| | ||||||| ||||| Sbjct 10380 GTCGCCGACGCGCTCAAGGAGTTCCAGATCCGCGCGACCGACGCGTCG 10333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150377613797124