Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq15 98.7 8e-16 seq281 82.4 6e-11 >seq15 Length=1479357 Score = 98.7 bits (108), Expect = 8e-16 Identities = 74/87 (85%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 108871 GTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGAC 108930 |||||| | |||| |||||||||| ||||||||||||||||||| |||||||||||| Sbjct 1355025 GTGGCGATGCTGGCGTTCGGCGAGGGCTGGCACAACTACCACCACGCCTTCCCCTACGAC 1354966 Query 108931 TACAAGGCCGCCGAGTTGGGGAACGAC 108957 |||||||| ||||| |||| ||| || Sbjct 1354965 TACAAGGCGGCCGAACTGGGCAACTAC 1354939 >seq281 Length=677872 Score = 82.4 bits (90), Expect = 6e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 |||| | |||||||| |||||||||||||||||||||||||| | ||||||| ||| | Sbjct 316718 TGGCGATGGGCGAGGGCTGGCACAACTACCACCACGTGTTCCCATGGGACTACAGGGCGG 316777 Query 108941 CCGAGTTGGG 108950 ||||| |||| Sbjct 316778 CCGAGCTGGG 316787 Score = 82.4 bits (90), Expect = 6e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 108883 GCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCC 108942 || || |||||||| |||||||||||||||||| |||||||| ||||||||| | ||| Sbjct 345195 GCCCTGGGCGAGGGCTGGCACAACTACCACCACACGTTCCCCTGGGACTACAAGACGGCC 345254 Query 108943 GAGTTGGGGAACGAC 108957 ||| |||| ||| || Sbjct 345255 GAGCTGGGCAACTAC 345269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381556172330352