Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_011335.1
Length=119343
Score E
Sequences producing significant alignments: (Bits) Value
seq15 98.7 8e-16
seq281 82.4 6e-11
>seq15
Length=1479357
Score = 98.7 bits (108), Expect = 8e-16
Identities = 74/87 (85%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 108871 GTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGAC 108930
|||||| | |||| |||||||||| ||||||||||||||||||| ||||||||||||
Sbjct 1355025 GTGGCGATGCTGGCGTTCGGCGAGGGCTGGCACAACTACCACCACGCCTTCCCCTACGAC 1354966
Query 108931 TACAAGGCCGCCGAGTTGGGGAACGAC 108957
|||||||| ||||| |||| ||| ||
Sbjct 1354965 TACAAGGCGGCCGAACTGGGCAACTAC 1354939
>seq281
Length=677872
Score = 82.4 bits (90), Expect = 6e-11
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940
|||| | |||||||| |||||||||||||||||||||||||| | ||||||| ||| |
Sbjct 316718 TGGCGATGGGCGAGGGCTGGCACAACTACCACCACGTGTTCCCATGGGACTACAGGGCGG 316777
Query 108941 CCGAGTTGGG 108950
||||| ||||
Sbjct 316778 CCGAGCTGGG 316787
Score = 82.4 bits (90), Expect = 6e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 108883 GCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCC 108942
|| || |||||||| |||||||||||||||||| |||||||| ||||||||| | |||
Sbjct 345195 GCCCTGGGCGAGGGCTGGCACAACTACCACCACACGTTCCCCTGGGACTACAAGACGGCC 345254
Query 108943 GAGTTGGGGAACGAC 108957
||| |||| ||| ||
Sbjct 345255 GAGCTGGGCAACTAC 345269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381556172330352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |