Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq1095 116 3e-21
seq738 82.4 5e-11
>seq1095
Length=312686
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|| || |||||||| ||||| || ||||| || || || ||||| |||||||| ||
Sbjct 81815 CCTCCACGCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAA 81756
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
||| | | | ||||| | || || || || | || | |||||| ||||| ||
Sbjct 81755 AGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGG 81696
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|||||||||||||| || ||| |||||| | || ||||||||| ||| ||
Sbjct 81695 ATTCCTTCCTTGTCTTGGATCTTGGCCTTTACATTCTCGATAGTATCGGATGGTTCAACT 81636
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || || ||||| || || |||||||||||||| || || |||||
Sbjct 81635 TCCAAAGTGATGGTCTTGCCGGTCAGAGTTTTTACGAATATCTGCAT 81589
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|| || |||||||| ||||| || ||||| || || || ||||| |||||||| ||
Sbjct 88636 CCTCCACGCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAA 88577
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
||| | | | ||||| | || || || || | || | |||||| ||||| ||
Sbjct 88576 AGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGG 88517
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|||||||||||||| || ||| |||||| | || ||||||||| ||| ||
Sbjct 88516 ATTCCTTCCTTGTCTTGGATCTTGGCCTTTACATTCTCGATAGTATCGGATGGTTCAACT 88457
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || || ||||| || || |||||||||||||| || || |||||
Sbjct 88456 TCCAAAGTGATGGTCTTGCCGGTCAGAGTTTTTACGAATATCTGCAT 88410
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| || ||||| ||||| || || || || ||||| || || |||| | |||||
Sbjct 82025 ACCAAGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCTGATAGTGTTCTACCATCTTCC 81966
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| ||| || |||||| | || | | ||| |||||| ||||||||||||||| ||
Sbjct 81965 AGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTGGAATTCCTTCCTTATCTTGG 81906
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| || || ||| | || |||||||| | ||| || || | ||| ||||||||
Sbjct 81905 ATCTTAGCCTTGACATTCTCAATAGTATCTGAAGGTTCAACTTCCAGGGTGATGGTTTTT 81846
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| |||| ||||| |||||||| ||||||
Sbjct 81845 CCAGTCAAGGTTTTGACAAAAATCTGCATA 81816
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| || ||||| ||||| || || || || ||||| || || |||| | |||||
Sbjct 88846 ACCAAGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCTGATAGTGTTCTACCATCTTCC 88787
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| ||| || |||||| | || | | ||| |||||| ||||||||||||||| ||
Sbjct 88786 AGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTGGAATTCCTTCCTTATCTTGG 88727
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| || || ||| | || |||||||| | ||| || || | ||| ||||||||
Sbjct 88726 ATCTTAGCCTTGACATTCTCAATAGTATCTGAAGGTTCAACTTCCAGGGTGATGGTTTTT 88667
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| |||| ||||| |||||||| ||||||
Sbjct 88666 CCAGTCAAGGTTTTGACAAAAATCTGCATA 88637
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
|| || ||||| ||||| || |||||||| || || | || | || || | ||
Sbjct 89068 TGGAGAGTAGATTCTTTCTGGATGTTGTAGTCAGACAGTGTCCTTCCATCCTCCAGCTGC 89009
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|| |||||| | || | |||||| |||||| ||| ||||| |||||||| ||| ||
Sbjct 89008 TTTCCAGCGAAAATGAGACGCTGCTGGTCGGGTGGGATTCCCTCCTTGTCTTGAATCTTA 88949
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
|| || | || || || || ||| || || || || |||||||| || |||
Sbjct 88948 GCCTTCACGTTCTCAATCGTGTCAGAGGGTTCAACTTCCAATGTGATGGTTTTGCCGGTC 88889
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
||||||||||| || ||||||||
Sbjct 88888 AGAGTTTTTACGAAGATTTGCAT 88866
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
|| || || || ||||| || |||||||| || || |||| | ||||| | ||
Sbjct 89296 TGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGTGTTCTGCCATCTTCCAGCTGC 89237
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|| |||||| | || | |||||| || || ||||| ||||||||||| ||| ||
Sbjct 89236 TTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATACCTTCCTTGTCTTGAATCTTA 89177
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
|| ||| | || ||||| || ||||| || | ||| ||||| || || |||
Sbjct 89176 GCCTTGACATTCTCGATAGTGTCTGATGGCTCTACTTCCAGGGTGATGGTCTTGCCGGTC 89117
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
||||| |||||||| ||||||||
Sbjct 89116 AGAGTCTTTACAAAGATTTGCAT 89094
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
|| || || || ||||| || |||||||| || || |||| | ||||| | ||
Sbjct 89524 TGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGTGTTCTGCCATCTTCCAGCTGC 89465
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|| |||||| | || | |||||| || || ||||| ||||||||||| ||| ||
Sbjct 89464 TTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATACCTTCCTTGTCTTGAATCTTA 89405
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
|| ||| | || ||||| || ||||| || | ||| ||||| || || |||
Sbjct 89404 GCCTTGACATTCTCGATAGTGTCTGATGGCTCTACTTCCAGGGTGATGGTCTTGCCGGTC 89345
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
||||| |||||||| ||||||||
Sbjct 89344 AGAGTCTTTACAAAGATTTGCAT 89322
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
|| || || || ||||| || |||||||| || || |||| | ||||| | ||
Sbjct 89752 TGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGTGTTCTGCCATCTTCCAGCTGC 89693
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|| |||||| | || | |||||| || || ||||| ||||||||||| ||| ||
Sbjct 89692 TTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATACCTTCCTTGTCTTGAATCTTA 89633
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
|| ||| | || ||||| || ||||| || | ||| ||||| || || |||
Sbjct 89632 GCCTTGACATTCTCGATAGTGTCTGATGGCTCTACTTCCAGGGTGATGGTCTTGCCGGTC 89573
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
||||| |||||||| ||||||||
Sbjct 89572 AGAGTCTTTACAAAGATTTGCAT 89550
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
|| || || || ||||| || |||||||| || || |||| | ||||| | ||
Sbjct 89980 TGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGTGTTCTGCCATCTTCCAGCTGC 89921
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|| |||||| | || | |||||| || || ||||| ||||||||||| ||| ||
Sbjct 89920 TTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATACCTTCCTTGTCTTGAATCTTA 89861
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
|| ||| | || ||||| || ||||| || | ||| ||||| || || |||
Sbjct 89860 GCCTTGACATTCTCGATAGTGTCTGATGGCTCTACTTCCAGGGTGATGGTCTTGCCGGTC 89801
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
||||| |||||||| ||||||||
Sbjct 89800 AGAGTCTTTACAAAGATTTGCAT 89778
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
|| || || || ||||| || |||||||| || || |||| | ||||| | ||
Sbjct 90208 TGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGTGTTCTGCCATCTTCCAGCTGC 90149
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|| |||||| | || | |||||| || || ||||| ||||||||||| ||| ||
Sbjct 90148 TTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATACCTTCCTTGTCTTGAATCTTA 90089
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
|| ||| | || ||||| || ||||| || | ||| ||||| || || |||
Sbjct 90088 GCCTTGACATTCTCGATAGTGTCTGATGGCTCTACTTCCAGGGTGATGGTCTTGCCGGTC 90029
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
||||| |||||||| ||||||||
Sbjct 90028 AGAGTCTTTACAAAGATTTGCAT 90006
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
|| || || || ||||| || |||||||| || || |||| | ||||| | ||
Sbjct 90436 TGGAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGTGTTCTGCCATCTTCCAGCTGC 90377
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|| |||||| | || | |||||| || || ||||| ||||||||||| ||| ||
Sbjct 90376 TTTCCAGCGAAGATAAGACGCTGCTGATCTGGAGGAATACCTTCCTTGTCTTGAATCTTA 90317
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
|| ||| | || ||||| || ||||| || | ||| ||||| || || |||
Sbjct 90316 GCCTTGACATTCTCGATAGTGTCTGATGGCTCTACTTCCAGGGTGATGGTCTTGCCGGTC 90257
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
||||| |||||||| ||||||||
Sbjct 90256 AGAGTCTTTACAAAGATTTGCAT 90234
>seq738
Length=407637
Score = 82.4 bits (90), Expect = 5e-11
Identities = 159/233 (68%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| || | |||||||| | ||| | || ||||| |||||||| || ||||| |
Sbjct 219701 CCACCACGAAGCCTTAAAACCAGATGCAATGTTGAATCCTTTTGTATATTATAATCCATT 219642
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | ||| | ||||||||||| || || | |||| | ||| ||||| || |||||
Sbjct 219641 ACGAATCTTGAATCTTCTAATTGCTTTCCTGAAAATATGAGACGTTGTTGATCTATTGGA 219582
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCT--ATTTTCTA 15127
|| ||||| || || || | ||||| | |||| ||||| | |||| ||
Sbjct 219581 ATACCTTCTTTATCTTTTATATACTCTTTTATTAGAGCTATTGTATCAGTTGATTTAATA 219522
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15180
|| | || || ||| | || || || ||| | ||||| || |||||||||
Sbjct 219521 --TCAATTGTGATTGTTCTCCCAGTAAGTGTTCTAACAAATATCTGCATATTT 219471
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357189206621030
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