Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_013055.1
Length=39896
Score E
Sequences producing significant alignments: (Bits) Value
seq2118 82.4 2e-11
>seq2118
Length=155287
Score = 82.4 bits (90), Expect = 2e-11
Identities = 187/280 (67%), Gaps = 10/280 (4%)
Strand=Plus/Plus
Query 8842 GAGGTCGCCGAAATATCGCGCGCACTCAAACAAATTGCGAAGGAACTCGACGTTCCGATC 8901
||| | |||||||| || || | || ||| | | || || || | | || || |
Sbjct 17719 GAGATTGCCGAAATTTCCCGTTCGCTTAAATCATTGGCAAAAGAGTTACAAGTACCTGTG 17778
Query 8902 ATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGCCCGTCATG 8961
||||| |||| || |||||||| | || || | | | | ||| || ||||
Sbjct 17779 ATCGCATTGTCACAACTTAATCGTAGCCTGGAACAAAGAGCGGATAAGAAACCGGTCAAT 17838
Query 8962 TCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTTTATCTAC 9021
|| ||| | || || || || | || |||||||||||||| | || | ||||| ||
Sbjct 17839 TCAGATTTACGGGAATCCGGCTCCATTGAGCAGGATGCCGATTTAATTATGTTTATTTAT 17898
Query 9022 CGCGATGAGGTCTATAACCCCGACAGCGCAGATC-----GCGGTACGGCCGAAATCATCA 9076
|| |||||||| ||||| ||| | |||||| | |||| || ||||| || |
Sbjct 17899 CGAGATGAGGTTTATAA---CGATAATTCAGATCTTAAAGGGGTA--GCAGAAATTATTA 17953
Query 9077 TTGCGAAGCAGCGAAACGGGCCGATTGGCACCGTACGGCT 9116
| | |||||||| || || |||||||| || ||||| ||
Sbjct 17954 TCGGTAAGCAGCGTAATGGCCCGATTGGAACAGTACGTCT 17993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127475083066968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |