Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq2118 82.4 2e-11 >seq2118 Length=155287 Score = 82.4 bits (90), Expect = 2e-11 Identities = 187/280 (67%), Gaps = 10/280 (4%) Strand=Plus/Plus Query 8842 GAGGTCGCCGAAATATCGCGCGCACTCAAACAAATTGCGAAGGAACTCGACGTTCCGATC 8901 ||| | |||||||| || || | || ||| | | || || || | | || || | Sbjct 17719 GAGATTGCCGAAATTTCCCGTTCGCTTAAATCATTGGCAAAAGAGTTACAAGTACCTGTG 17778 Query 8902 ATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGCCCGTCATG 8961 ||||| |||| || |||||||| | || || | | | | ||| || |||| Sbjct 17779 ATCGCATTGTCACAACTTAATCGTAGCCTGGAACAAAGAGCGGATAAGAAACCGGTCAAT 17838 Query 8962 TCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTTTATCTAC 9021 || ||| | || || || || | || |||||||||||||| | || | ||||| || Sbjct 17839 TCAGATTTACGGGAATCCGGCTCCATTGAGCAGGATGCCGATTTAATTATGTTTATTTAT 17898 Query 9022 CGCGATGAGGTCTATAACCCCGACAGCGCAGATC-----GCGGTACGGCCGAAATCATCA 9076 || |||||||| ||||| ||| | |||||| | |||| || ||||| || | Sbjct 17899 CGAGATGAGGTTTATAA---CGATAATTCAGATCTTAAAGGGGTA--GCAGAAATTATTA 17953 Query 9077 TTGCGAAGCAGCGAAACGGGCCGATTGGCACCGTACGGCT 9116 | | |||||||| || || |||||||| || ||||| || Sbjct 17954 TCGGTAAGCAGCGTAATGGCCCGATTGGAACAGTACGTCT 17993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127475083066968