Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1864 95.1 1e-14
seq649 95.1 1e-14
seq490 89.7 6e-13
>seq1864
Length=188450
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 175893 TGAGTTTTGTGAAGATGTACCTCG--TTTGAGACGCATCTTTGCCACCCATGAGACGCGT 175950
|||| | ||||||||||| | || ||| | || || ||||| ||| | |||||
Sbjct 142250 TGAGCATGGTGAAGATGTAACGCGGACTTGCG--GCGTCCTTGCCGCCCTGCAATCGCGT 142307
Query 175951 CCCAAATTGACCACATGGCTCAAGGAGATTGATATTGTTTGAGCCCATATAGTCATTCGC 176010
|| || ||||| |||| | || ||||| ||||| ||||| ||||| | |||
Sbjct 142308 GCCGAACTGACCGAGCGGCTGCAACAGGTTGATGTTGTTGCTGCCCACATAGTTCTGCGC 142367
Query 176011 CAACTTGACAATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGC 176070
|| |||| || || | || || || |||||||| ||||||||||||| || ||
Sbjct 142368 CAGGTTGATGATGGTCGACATCAGTGACACCTCACCGTGGTGGTAGGCCGACTGCTCGGC 142427
Query 176071 CACATACGCCGCCAACTGCGCCACCTTCATCTCATCCTTG 176110
||| || | |||| ||| |||||||| |||||| ||||
Sbjct 142428 CACCGACCCGGCCAGCTGGGCCACCTTGATCTCACGCTTG 142467
>seq649
Length=437485
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 175893 TGAGTTTTGTGAAGATGTACCTCGT--TTGAGACGCATCTTTGCCACCCATGAGACGCGT 175950
|||| | ||||||||||| | || ||| | || || ||||| ||| || |||||
Sbjct 394667 TGAGCATGGTGAAGATGTAACGCGGACTTGCGGCG--TCCTTGCCGCCCTGCAGTCGCGT 394610
Query 175951 CCCAAATTGACCACATGGCTCAAGGAGATTGATATTGTTTGAGCCCATATAGTCATTCGC 176010
|| || ||||| |||| | || ||||| ||||| ||||| |||| | |||
Sbjct 394609 GCCGAACTGACCGAGCGGCTGCAACAGGTTGATGTTGTTGCTGCCCACGTAGTTTTGCGC 394550
Query 176011 CAACTTGACAATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGC 176070
|| |||| || || | || || || |||||||| ||||||||||||| || ||
Sbjct 394549 CAGGTTGATGATGGTCGACATCAGTGACACCTCACCGTGGTGGTAGGCCGACTGCTCGGC 394490
Query 176071 CACATACGCCGCCAACTGCGCCACCTTCATCTCATCCTTG 176110
||| || | |||| ||| |||||||| |||||| ||||
Sbjct 394489 CACCGACCCGGCCAGCTGGGCCACCTTGATCTCACGCTTG 394450
>seq490
Length=515312
Score = 89.7 bits (98), Expect = 6e-13
Identities = 153/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 175893 TGAGTTTTGTGAAGATGTACCTCGT--TTGAGACGCATCTTTGCCACCCATGAGACGCGT 175950
|||| | ||||||||||| | | ||| | || || ||||| ||| || |||||
Sbjct 446766 TGAGCATGGTGAAGATGTAACGTGGACTTGCGGCG--TCCTTGCCGCCCTGCAGTCGCGT 446823
Query 175951 CCCAAATTGACCACATGGCTCAAGGAGATTGATATTGTTTGAGCCCATATAGTCATTCGC 176010
|| || ||||| |||| | || ||||| ||||| ||||| |||| | |||
Sbjct 446824 GCCGAACTGACCGAGCGGCTGCAACAGGTTGATGTTGTTGCTGCCCACGTAGTTTTGCGC 446883
Query 176011 CAACTTGACAATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGC 176070
|| |||| || || | || || || |||||||| ||||||||||||| || ||
Sbjct 446884 CAGGTTGATGATGGTCGACATCAGTGACACCTCACCGTGGTGGTAGGCCGACTGCTCGGC 446943
Query 176071 CACATACGCCGCCAACTGCGCCACCTTCATCTCATCCTTG 176110
||| || | |||| ||| |||||||| |||||| ||||
Sbjct 446944 CACCGACCCGGCCAGCTGGGCCACCTTGATCTCACGCTTG 446983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613150154147280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |