Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1864 95.1 1e-14 seq649 95.1 1e-14 seq490 89.7 6e-13 >seq1864 Length=188450 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 175893 TGAGTTTTGTGAAGATGTACCTCG--TTTGAGACGCATCTTTGCCACCCATGAGACGCGT 175950 |||| | ||||||||||| | || ||| | || || ||||| ||| | ||||| Sbjct 142250 TGAGCATGGTGAAGATGTAACGCGGACTTGCG--GCGTCCTTGCCGCCCTGCAATCGCGT 142307 Query 175951 CCCAAATTGACCACATGGCTCAAGGAGATTGATATTGTTTGAGCCCATATAGTCATTCGC 176010 || || ||||| |||| | || ||||| ||||| ||||| ||||| | ||| Sbjct 142308 GCCGAACTGACCGAGCGGCTGCAACAGGTTGATGTTGTTGCTGCCCACATAGTTCTGCGC 142367 Query 176011 CAACTTGACAATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGC 176070 || |||| || || | || || || |||||||| ||||||||||||| || || Sbjct 142368 CAGGTTGATGATGGTCGACATCAGTGACACCTCACCGTGGTGGTAGGCCGACTGCTCGGC 142427 Query 176071 CACATACGCCGCCAACTGCGCCACCTTCATCTCATCCTTG 176110 ||| || | |||| ||| |||||||| |||||| |||| Sbjct 142428 CACCGACCCGGCCAGCTGGGCCACCTTGATCTCACGCTTG 142467 >seq649 Length=437485 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 175893 TGAGTTTTGTGAAGATGTACCTCGT--TTGAGACGCATCTTTGCCACCCATGAGACGCGT 175950 |||| | ||||||||||| | || ||| | || || ||||| ||| || ||||| Sbjct 394667 TGAGCATGGTGAAGATGTAACGCGGACTTGCGGCG--TCCTTGCCGCCCTGCAGTCGCGT 394610 Query 175951 CCCAAATTGACCACATGGCTCAAGGAGATTGATATTGTTTGAGCCCATATAGTCATTCGC 176010 || || ||||| |||| | || ||||| ||||| ||||| |||| | ||| Sbjct 394609 GCCGAACTGACCGAGCGGCTGCAACAGGTTGATGTTGTTGCTGCCCACGTAGTTTTGCGC 394550 Query 176011 CAACTTGACAATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGC 176070 || |||| || || | || || || |||||||| ||||||||||||| || || Sbjct 394549 CAGGTTGATGATGGTCGACATCAGTGACACCTCACCGTGGTGGTAGGCCGACTGCTCGGC 394490 Query 176071 CACATACGCCGCCAACTGCGCCACCTTCATCTCATCCTTG 176110 ||| || | |||| ||| |||||||| |||||| |||| Sbjct 394489 CACCGACCCGGCCAGCTGGGCCACCTTGATCTCACGCTTG 394450 >seq490 Length=515312 Score = 89.7 bits (98), Expect = 6e-13 Identities = 153/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 175893 TGAGTTTTGTGAAGATGTACCTCGT--TTGAGACGCATCTTTGCCACCCATGAGACGCGT 175950 |||| | ||||||||||| | | ||| | || || ||||| ||| || ||||| Sbjct 446766 TGAGCATGGTGAAGATGTAACGTGGACTTGCGGCG--TCCTTGCCGCCCTGCAGTCGCGT 446823 Query 175951 CCCAAATTGACCACATGGCTCAAGGAGATTGATATTGTTTGAGCCCATATAGTCATTCGC 176010 || || ||||| |||| | || ||||| ||||| ||||| |||| | ||| Sbjct 446824 GCCGAACTGACCGAGCGGCTGCAACAGGTTGATGTTGTTGCTGCCCACGTAGTTTTGCGC 446883 Query 176011 CAACTTGACAATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGC 176070 || |||| || || | || || || |||||||| ||||||||||||| || || Sbjct 446884 CAGGTTGATGATGGTCGACATCAGTGACACCTCACCGTGGTGGTAGGCCGACTGCTCGGC 446943 Query 176071 CACATACGCCGCCAACTGCGCCACCTTCATCTCATCCTTG 176110 ||| || | |||| ||| |||||||| |||||| |||| Sbjct 446944 CACCGACCCGGCCAGCTGGGCCACCTTGATCTCACGCTTG 446983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613150154147280