Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq293 105 1e-17 >seq293 Length=664131 Score = 105 bits (116), Expect = 1e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 ||| || || || |||||||| | || | | | | |||| |||| | || |||| | Sbjct 199783 CTGGAATTCGCCAGACAGCACTCGTCTCGAGTAGATGTTGGAGGTGTAGGGCTCGACTGA 199842 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 |||||||||||||| |||||||||||| ||| || ||||||||||||| ||||| || Sbjct 199843 CTCGTTGTTGCCGAGGATCTGAGCGGTGGAGGCGGTCGGCATGGGAGCCAATAGCAGTGA 199902 Query 204316 GTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACT 204375 |||||| || || | || | | | |||||| | | |||||| || || | Sbjct 199903 GTTGCGGACGCCATGTTGCGCTATCTTCGCCTTCAGCGCCGCCCAGTCCCACAGCGAGGT 199962 Query 204376 GGGTTTCACGCCCCACATGTCGAACTGAAAGAT 204408 || |||| |||||||||||| | || | ||| Sbjct 199963 CGGCGTCACTCCCCACATGTCGTATTGCAGGAT 199995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794692439552480