Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq412 86.0 7e-12 seq293 82.4 9e-11 >seq412 Length=567167 Score = 86.0 bits (94), Expect = 7e-12 Identities = 143/202 (71%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352 ||||||| || |||||||| ||||| |||| || || ||||||||||| ||||||| Sbjct 173412 CCTCATCGCGCGAAATAAGCTCATTGCTGAAGGTGAGACCAGGCATGAGACCACGCTTCT 173471 Query 117353 TCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 | | ||| | || | |||| || || ||||||||||| ||||| || || ||| Sbjct 173472 TAAGCCAGAATATGGACGCA-AAGCTGCCCGAGAAGAAGATGCCCTCAACGGCGGCGAAC 173530 Query 117412 GCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTG--TGTCAAACCATTTCATTGCCCATT 117469 || | || |||||| |||| | | | |||| || | | ||| | || ||||| | Sbjct 173531 GCCACAACTCGCTCGCCGAACGTGGCCG--TTTGGCTGGCGATCCACTGCAACGCCCAGT 173588 Query 117470 TCGCCTTCTTCTCAATACATGG 117491 ||||||| ||| || ||| || Sbjct 173589 CCGCCTTCCTCTTAACACACGG 173610 >seq293 Length=664131 Score = 82.4 bits (90), Expect = 9e-11 Identities = 130/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 107151 GGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGT 107210 || || | ||||||| ||| |||| ||| || ||||| |||| || || || | || | Sbjct 209137 GGTAGTACCTGGACAGCTGAGGTCGTGGCGTGGCAGCACTGAACAGAGTAGGCGACGCAT 209196 Query 107211 GAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCC 107269 | |||| ||||| | ||| | | || ||| ||||| | | ||| || ||||| || Sbjct 209197 GCGTGAAG-TACCTCTCGGAGAGCAGGTTGTAAGTCTCGATGGCAGCGTCGATGTCCTCG 209255 Query 107270 CCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCA 107329 ||||| ||||| | ||||||||||| ||||| | || ||| |||| | ||||| Sbjct 209256 CCGTGAATGCCAACCGCCACACGCATCAACATCTGCTGCGGTCGCTCCACCACTTTGCCA 209315 Query 107330 TCGA 107333 |||| Sbjct 209316 TCGA 209319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589637445923920