Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq412 86.0 7e-12
seq293 82.4 9e-11
>seq412
Length=567167
Score = 86.0 bits (94), Expect = 7e-12
Identities = 143/202 (71%), Gaps = 6/202 (3%)
Strand=Plus/Plus
Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352
||||||| || |||||||| ||||| |||| || || ||||||||||| |||||||
Sbjct 173412 CCTCATCGCGCGAAATAAGCTCATTGCTGAAGGTGAGACCAGGCATGAGACCACGCTTCT 173471
Query 117353 TCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411
| | ||| | || | |||| || || ||||||||||| ||||| || || |||
Sbjct 173472 TAAGCCAGAATATGGACGCA-AAGCTGCCCGAGAAGAAGATGCCCTCAACGGCGGCGAAC 173530
Query 117412 GCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTG--TGTCAAACCATTTCATTGCCCATT 117469
|| | || |||||| |||| | | | |||| || | | ||| | || ||||| |
Sbjct 173531 GCCACAACTCGCTCGCCGAACGTGGCCG--TTTGGCTGGCGATCCACTGCAACGCCCAGT 173588
Query 117470 TCGCCTTCTTCTCAATACATGG 117491
||||||| ||| || ||| ||
Sbjct 173589 CCGCCTTCCTCTTAACACACGG 173610
>seq293
Length=664131
Score = 82.4 bits (90), Expect = 9e-11
Identities = 130/184 (71%), Gaps = 2/184 (1%)
Strand=Plus/Plus
Query 107151 GGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGT 107210
|| || | ||||||| ||| |||| ||| || ||||| |||| || || || | || |
Sbjct 209137 GGTAGTACCTGGACAGCTGAGGTCGTGGCGTGGCAGCACTGAACAGAGTAGGCGACGCAT 209196
Query 107211 GAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCC 107269
| |||| ||||| | ||| | | || ||| ||||| | | ||| || ||||| ||
Sbjct 209197 GCGTGAAG-TACCTCTCGGAGAGCAGGTTGTAAGTCTCGATGGCAGCGTCGATGTCCTCG 209255
Query 107270 CCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCA 107329
||||| ||||| | ||||||||||| ||||| | || ||| |||| | |||||
Sbjct 209256 CCGTGAATGCCAACCGCCACACGCATCAACATCTGCTGCGGTCGCTCCACCACTTTGCCA 209315
Query 107330 TCGA 107333
||||
Sbjct 209316 TCGA 209319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589637445923920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |