Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_015263.1 Length=114768 Score E Sequences producing significant alignments: (Bits) Value seq13085 246 2e-60 seq10675 118 8e-22 >seq13085 Length=1678 Score = 246 bits (272), Expect = 2e-60 Identities = 219/280 (78%), Gaps = 43/280 (15%) Strand=Plus/Plus Query 45450 TGGTATATAATAACAGGATATGGTGTTAATGGTAGCATGCGTGTTTTGGGAACATGTAGT 45509 ||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1336 TGGCATATAGTAACAGGATATAGTGTTAATGGTAGCATGCGTGTTTTGGGAACATGTAGT 1395 Query 45510 GCTGGTTCGAGTCCAGCTATCCTGATGAGTGGTGTATAGTCC----ACGAAGTGCTAAGC 45565 | |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 1396 GTTGGTTCGAGTCCAGCTATCCTGATGAGTGGTGTATAGTCCATAGACGAAGTGTTAAGC 1455 Query 45566 TATTGCGCAGTACCTTGGCTCAACTATACAAGAACCATATTGAACATAACTGGTGCATGG 45625 || |||| ||||||||| | |||||||||||| || Sbjct 1456 TA-------------TGGCACAACTATAC--------------AGATAACTGGTGCACGG 1488 Query 45626 TTATTAGGATATGGGGTTAGTTAACGGAAGACCTAGTGTATTAAAGTGTCACAGGCTTAA 45685 |||| | || ||||| ||| ||||||||||||||||||||||||| ||| Sbjct 1489 TTAT-----------ATCAGCTAACGAAAGTCCTAGTGTATTAAAGTGTCACAGGCATAA 1537 Query 45686 TTAAGTGACAGCTGATTAGAGTAA-CAGGTGTGCTAACGT 45724 ||||||||||||| ||||||||| |||||| ||||||| Sbjct 1538 CTAAGTGACAGCTGGTTAGAGTAATAAGGTGTACTAACGT 1577 Score = 100 bits (110), Expect = 2e-16 Identities = 63/67 (94%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 46718 AAAGACTAAGGTGTACCGATTGACGGTACTTAAATGTCATAGAGTTGACAGCCAAGCAGA 46777 ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 1032 AAAGAATA-GGTGTACTGATTGACGGTACTTAAATGTCATAGAGTTGACAGCCAAGCATA 1090 Query 46778 GGGTGCA 46784 ||||||| Sbjct 1091 GGGTGCA 1097 >seq10675 Length=2892 Score = 118 bits (130), Expect = 8e-22 Identities = 118/149 (79%), Gaps = 8/149 (5%) Strand=Plus/Plus Query 21855 AGTAGTATTGAATTAAAAAATGAAAGTTTATGCTTGACAAAATGAAAATTA--TTTAGCA 21912 ||||| | | ||| ||||||| | | || ||||||| || ||||| ||| | | Sbjct 385 AGTAGAAATAAATAAAAAAATATCATCTAATATTTGACAAC--GATAATTAATTTTGGTA 442 Query 21913 TAATAGTATATATAGAAATAAAGGAGAACATAAATAATGGTA---AAATTAACACAAAAA 21969 ||||||||||||||||||||||||||||| ||| ||||||| |||||||| |||||| Sbjct 443 TAATAGTATATATAGAAATAAAGGAGAAC-TAACAAATGGTAGTCAAATTAACGCAAAAA 501 Query 21970 CAAGCCGATTATCTTAAAAGTTTTAGAAA 21998 ||||| ||||||||| ||| |||| |||| Sbjct 502 CAAGCTGATTATCTTGAAACTTTTGGAAA 530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 366924479441502