Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1095 114 8e-21 seq10469 84.2 1e-11 >seq1095 Length=312686 Score = 114 bits (126), Expect = 8e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| | ||| |||||||||||||||| ||| ||| || |||||||| ||||| ||| Sbjct 81815 CCTCCACGCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAA 81756 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| || ||||| ||||||||||| || || || ||||||||| | || Sbjct 81755 AGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGG 81696 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932 | || |||||||| ||||| || || || || || | || | |||| Sbjct 81695 ATTCCTTCCTTGTCTTGGATCTTGGCCTTTAC--ATTCTCGATAGTATCGGATGGTTCAA 81638 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | || ||||| || || || ||||| || || || |||||||| Sbjct 81637 CTTCCAAAGTGATGGTCTTGCCGGTCAGAGTTTTTACGAATATCTGCAT 81589 Score = 114 bits (126), Expect = 8e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| | ||| |||||||||||||||| ||| ||| || |||||||| ||||| ||| Sbjct 88636 CCTCCACGCAATCTCAAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAA 88577 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| || ||||| ||||||||||| || || || ||||||||| | || Sbjct 88576 AGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGG 88517 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932 | || |||||||| ||||| || || || || || | || | |||| Sbjct 88516 ATTCCTTCCTTGTCTTGGATCTTGGCCTTTAC--ATTCTCGATAGTATCGGATGGTTCAA 88459 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | || ||||| || || || ||||| || || || |||||||| Sbjct 88458 CTTCCAAAGTGATGGTCTTGCCGGTCAGAGTTTTTACGAATATCTGCAT 88410 Score = 111 bits (122), Expect = 1e-19 Identities = 166/234 (71%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| | |||||||| |||||||| | ||| || ||||| ||||| ||||| | Sbjct 84695 TTCCTCCACGCAACCTCAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAG 84636 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 | ||| ||| |||| || ||||| ||||||||||| || |||| |||||||| | | Sbjct 84635 ACAGGGTTCTGCCATCCTCGAGCTGCTTTCCGGCAAAGATGAGTCTCTGCTGGTCGGGTG 84576 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTC 34930 | | ||||||||||| ||||| || || || || |||| || | ||| Sbjct 84575 GAATTCCCTCCTTGTCTTGGATCTTGGCCTTTAC--ATTCTCAATCGTGTCCGACGGCTC 84518 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || || | || || || || || || | || ||||||||||||||||| || Sbjct 84517 CACCTCCAACGTAATTGTCTTGCCGGTCAACGTTTTCACAAAGATCTGCATTTT 84464 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | ||| |||||| || ||||| ||||| || ||| ||| |||| || Sbjct 90671 AACCAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAGTCAGACAGGGTTCTACCATCCTC 90612 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||| || ||||| || || || |||| |||||||| | || | ||||||||||| Sbjct 90611 CAGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTGGAATTCCCTCCTTGTCTTG 90552 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| || ||| | | || | || || ||| || || | ||| ||||| || Sbjct 90551 GATCTTGGCCTTCACGTTTTCAATGGTATCGGAGGGCTCCACTTCCAAGGTGATGGTCTT 90492 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || |||||||| |||||||| ||||| Sbjct 90491 GCCGGTCAGAGTCTTTACAAAGATTTGCAT 90462 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||| ||||| ||||| || || | | | |||| |||||||| ||||| || || Sbjct 89057 TTCTTTCTGGATGTTGTAGTCAGACAGTGTCCTTCCATCCTCCAGCTGCTTTCCAGCGAA 88998 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || |||||||| | || | ||||||||||| |||||| || ||| Sbjct 88997 AATGAGACGCTGCTGGTCGGGTGGGATTCCCTCCTTGTCTTGAATCTTAGCCTTCACGTT 88938 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | |||| ||| || ||||| || | || |||||||| || || ||||| || || Sbjct 88937 CTCAATCGTGTCAGAGGGTTCAACTTCCAATGTGATGGTTTTGCCGGTCAGAGTTTTTAC 88878 Query 34970 AAAGATCTGCAT 34981 ||||| ||||| Sbjct 88877 GAAGATTTGCAT 88866 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851 ||||||| ||||| ||||| || ||| ||| |||| || ||||| ||||||||||| | Sbjct 78073 CTTTCTGGATGTTGTAGTCAGACAGGGTTCTGCCATCTTCGAGCTGCTTTCCGGCAAAAA 78014 Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911 | |||| |||||||| | || | ||||||||||| ||||| || || || Sbjct 78013 TAAGTCTCTGCTGGTCGGGTGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTTAC--ATT 77956 Query 34912 CT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 || |||| || | ||| || || | || || || || || || | || ||||| Sbjct 77955 CTCAATCGTGTCCGACGGCTCCACCTCCAACGTAATTGTCTTGCCGGTCAACGTTTTCAC 77896 Query 34970 AAAGATCTGCATATT 34984 |||||||||||| || Sbjct 77895 AAAGATCTGCATTTT 77881 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| ||| |||||||| || ||||| || || ||| |||| ||| Sbjct 82025 ACCAAGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCTGATAGTGTTCTACCATCTTCC 81966 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || || ||||| || || || |||| |||||||| | || | || ||||| || Sbjct 81965 AGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTGGAATTCCTTCCTTATCTTGG 81906 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||||| ||||| || || || | || | ||||| || | ||| ||||||| Sbjct 81905 ATCTTAGCCTTGAC--ATTCTCAATAGTATCTGAAGGTTCAACTTCCAGGGTGATGGTTT 81848 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| || | || || ||||| ||||||||| Sbjct 81847 TTCCAGTCAAGGTTTTGACAAAAATCTGCATA 81816 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| ||| |||||||| || ||||| || || ||| |||| ||| Sbjct 88846 ACCAAGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCTGATAGTGTTCTACCATCTTCC 88787 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || || ||||| || || || |||| |||||||| | || | || ||||| || Sbjct 88786 AGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTGGAATTCCTTCCTTATCTTGG 88727 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||||| ||||| || || || | || | ||||| || | ||| ||||||| Sbjct 88726 ATCTTAGCCTTGAC--ATTCTCAATAGTATCTGAAGGTTCAACTTCCAGGGTGATGGTTT 88669 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| || | || || ||||| ||||||||| Sbjct 88668 TTCCAGTCAAGGTTTTGACAAAAATCTGCATA 88637 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851 |||||||||| || ||||| || ||| | || |||| || ||||| ||||| || || | Sbjct 79335 CTTTCTGAATATTGTAGTCGGACAGGGTACGGCCATCTTCAAGCTGCTTTCCAGCGAAAA 79276 Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911 | || || ||||| || | || | ||||||||||| ||||| || ||| | Sbjct 79275 TGAGACGCTGCTGATCGGGTGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTTT 79216 Query 34912 CTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAA 34971 | || | || || ||| || || | || ||||| ||||| || | ||||| |||| Sbjct 79215 CAATGGTGTCTGAGGGCTCCACTTCCAACGTGATGGTCTTTCCAGTCAACGTCTTGACAA 79156 Query 34972 AGATCTGCATA 34982 |||| |||||| Sbjct 79155 AGATTTGCATA 79145 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851 |||||||||| || ||||| || ||| | || |||| || ||||| ||||| || || | Sbjct 86156 CTTTCTGAATATTGTAGTCGGACAGGGTACGGCCATCTTCAAGCTGCTTTCCAGCGAAAA 86097 Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911 | || || ||||| || | || | ||||||||||| ||||| || ||| | Sbjct 86096 TGAGACGCTGCTGATCGGGTGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTTT 86037 Query 34912 CTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAA 34971 | || | || || ||| || || | || ||||| ||||| || | ||||| |||| Sbjct 86036 CAATGGTGTCTGAGGGCTCCACTTCCAACGTGATGGTCTTTCCAGTCAACGTCTTGACAA 85977 Query 34972 AGATCTGCATA 34982 |||| |||||| Sbjct 85976 AGATTTGCATA 85966 >seq10469 Length=3016 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851 |||||||||| || ||||| || ||| | || |||| || ||||| ||||| || || | Sbjct 934 CTTTCTGAATATTGTAGTCAGACAGGGTACGGCCATCTTCAAGCTGCTTTCCAGCGAAAA 875 Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911 | || || ||||| || | || | ||||||||||| ||||| || ||| | Sbjct 874 TGAGACGCTGCTGATCGGGTGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTTT 815 Query 34912 CTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAA 34971 | || | || | ||| || || | || ||||| ||||| || | ||||| |||| Sbjct 814 CAATGGTGTCTGACGGCTCCACTTCCAATGTAATGGTCTTTCCAGTCAACGTCTTGACAA 755 Query 34972 AGATCTGCATA 34982 |||| |||||| Sbjct 754 AGATTTGCATA 744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324449394576624