Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_015780.1
Length=205791
Score E
Sequences producing significant alignments: (Bits) Value
seq2630 275 8e-69
seq1041 214 2e-50
>seq2630
Length=110644
Score = 275 bits (304), Expect = 8e-69
Identities = 471/674 (70%), Gaps = 21/674 (3%)
Strand=Plus/Minus
Query 186872 AAGAACTTATGGTTAAAGATGAACCTAAAACAAAAAATCAGGTTATATACATCGCCACTA 186931
||||| | ||| ||||||| || |||| ||||| || ||| ||||| ||||| || ||||
Sbjct 95626 AAGAAATGATGATTAAAGACGATCCTATAACAAGAACTCAAGTTATCTACATTGCAACTA 95567
Query 186932 CTAAACTTTATGCTAAAAATAACCTTTTTAAAGTTGGTGGAACTGATGGTATAGATAAGC 186991
|| | | ||||| || ||| || |||||||||||| ||||| || | |||||
Sbjct 95566 CTGAGTTGTATGCCAATTCCAACAACTTCAAAGTTGGTGGAGTTGATGATACAAGTAAGC 95507
Query 186992 TTAAATCTAGGTTGTGTACTTATAATACCGGTAGAGTACACGAAGACTTGTTTTACTACT 187051
||||||| || |||||||| ||||| || || || || || || || || || |
Sbjct 95506 TTAAATCCAGATTGTGTACATATAACACTGGAAGGGTTACTGAGGATCAATTCTATTATT 95447
Query 187052 CGGATACTTTTATGGTTTCAGATTACCATCAAATTGAATCGAGATTAAAAGATTTATTAG 187111
| ||| ||||||||| || ||||||| | || ||| | ||| ||| |||| |||
Sbjct 95446 CCAATATTTTTATGGTATCTAATTACCACCTTATAGAAGCTCAATTGAAAAATTTGTTAC 95387
Query 187112 GGTGTTTTAGGAACAAGAAAGAGAAGGAAATGTATCGTCTTCATTATACTGATTTGAGAT 187171
| ||||||||||| ||||| ||||| ||||| || || || || | || | | ||
Sbjct 95386 ACCGATTTAGGAACAAAAAAGAAAAGGAGATGTACCGACTACACTACTCAGACATCAAAT 95327
Query 187172 ATATAGTCGAGTACCTGTGTACTCATTACTCTGAAGAAGTAGACGAAGTGAATGCTAAAC 187231
|||| ||||| || || |||| | ||||| || || ||| | || ||||
Sbjct 95326 ATATTGTCGATTATCTCTGTAAGAGAGATGGAGAAGACGTGGAAGAAATCAACTCTAAGT 95267
Query 187232 TAGCCCAATTCATTGCTAATTTGAATAAACGTAAATTAAGACCTGTTGTTCCACCCGCGT 187291
| | || || ||||||||||| |||| ||| || || || || | ||||||| ||
Sbjct 95266 TGACTCAGTTAATTGCTAATTTAAATAGACGCAATTTGAGGCCCATAGTTCCACTTCCG- 95208
Query 187292 TACAC-TCTTATCTAACAAGTGTAACTTGTTTAAATAAAGATGGAACTGTAGATTGTACA 187350
|||| |||||||||| ||| ||| |||| || ||||||||||||| ||| |
Sbjct 95207 AACACAAGCTATCTAACAAATGTGACTCGTTTGAAAGAAGATGGAACTGTGGATCAAGTA 95148
Query 187351 ACCATAAAATCATCTTCGTTTGAAG-------GAA--TGGTAAAAGAGTATATCTTAAAA 187401
||||| ||||| || |||||| ||| | || ||||||||||| |||
Sbjct 95147 ACCATTAAATCTGACTCCGTTGAAGATTTTGAGAAGGTTGTGAAAGAGTATATTCTAACC 95088
Query 187402 CTAAGT---GATACAACAACTGAGATAACTAAGAAAAAGGTATTTGATGATCTTCAAGT- 187457
||| | | | |||| | ||| ||||||||||||| || || || ||| | ||
Sbjct 95087 ATAAATCCAGGTGTAACATC---GATTTCTAAGAAAAAGGTGTTCGACGA-CTT-ATGTA 95033
Query 187458 TAAA-AAAGACCGCAAAGATAAATTTCCAATTTTGAGAGCTATTTTAGCTCAACTTAGAC 187516
|||| ||| | || || | ||| ||||||||| | || |||||||| ||| ||||||
Sbjct 95032 TAAAGAAAAATCGAAATGCTAAGTTTCCAATTCTTCAAGTTATTTTAGGCCAAATTAGAC 94973
Query 187517 CAGAAATTAAATTA 187530
||||||||||| ||
Sbjct 94972 CAGAAATTAAACTA 94959
>seq1041
Length=325342
Score = 214 bits (236), Expect = 2e-50
Identities = 458/674 (68%), Gaps = 33/674 (5%)
Strand=Plus/Plus
Query 186872 AAGAACTTATGGTTAAAGATGAACCTAAAACAAAAAATCAGGTTATATACATCGCCACTA 186931
||||| | ||| ||||||| || |||| ||||| || ||| ||||| ||||| || ||||
Sbjct 171307 AAGAAATGATGATTAAAGACGATCCTATAACAAGAACTCAAGTTATCTACATTGCAACTA 171366
Query 186932 CTAAACTTTATGCTAAAAATAACCTTTTTAAAGTTGGTGGAACTGATGGTATAGATAAGC 186991
|| | | ||||| || ||| || |||||||||||| ||||| || | |||||
Sbjct 171367 CTGAGTTGTATGCCAATTCCAACAACTTCAAAGTTGGTGGAGTTGATGATACAAGTAAGC 171426
Query 186992 TTAAATCTAGGTTGTGTACTTATAATACCGGTAGAGTACACGAAGACTTGTTTTACTACT 187051
||||||| || |||||||| ||||| || || || || || || || || || |
Sbjct 171427 TTAAATCCAGATTGTGTACATATAACACTGGAAGGGTTACTGAGGATCAATTCTATTATT 171486
Query 187052 CGGATACTTTTATGGTTTCAGATTACCATCAAATTGAATCGAGATTAAAAGATTTATTAG 187111
| ||| ||||||||| || ||||||| | || ||| | ||| ||| |||| |||
Sbjct 171487 CCAATATTTTTATGGTATCTAATTACCACCTTATAGAAGCTCAATTGAAAAATTTGTTAC 171546
Query 187112 GGTGTTTTAGGAACAAGAAAGAGAAGGAAATGTATCGTCTTCATTATACTGATTTGAGAT 187171
| ||||||||||| ||||| ||||| ||||| || ||||||||| | || | | |
Sbjct 171547 ACCGATTTAGGAACAAAAAAGAAAAGGAGATGTACCGACTTCATTATTCGGACGTCAAGT 171606
Query 187172 ATATAGTCGAGTACCTGTGTACTCATTACTCTGAAGAAGTAGACGAAGTGAATGCTAAAC 187231
| || || | || || | | | | ||||| ||||| |||| || | ||
Sbjct 171607 ACATTATCAATTATCTCTCCAAACGAGATGGCGAAGATGTAGATCAAGTCAACTCCAAGT 171666
Query 187232 TAGCCCAATTCATTGCTAATTTGAATAAACGTAAATTAAGACCTGTTGTTCCACCCGCGT 187291
| | ||||| || ||||||||||| || ||| || |||||| | |||||| || |
Sbjct 171667 TGACTCAATTTATATGTAATTTGAATAGACATAACTTGAGACCTATAGTTCCA-CCTCCA 171725
Query 187292 TACAC-TCTTATCTAACAAGTGTAACTTGTTTAAATAAAGATGGAACTGTAGATTGTACA 187350
|||| ||| || || ||| || ||| || ||||| || || |
Sbjct 171726 AACACAAGTTACCTTACTTCAGTAGCTCTTTTGAAAGAAGAT--AA----AG------TA 171773
Query 187351 ACCATAAAATCA---TCTTC------GTTTGAAGGAATGGTAAAAGAGTATATCTTAAAA 187401
||||| |||||| ||| | ||||| | | || |||||||| || |||
Sbjct 171774 ACCATTAAATCAGACTCTCCTGAAGAATTTGAGAGGGTAGTGAAAGAGTACATTCTAACC 171833
Query 187402 CTAAGT---GATACAACAACTGAGATAACTAAGAAAAAGGTATTTGATGATCTTCAAGT- 187457
|||| | | | |||| | ||| ||||||||||||| || || || ||| | ||
Sbjct 171834 CTAAATCCAGGTGTAACATC---GATTTCTAAGAAAAAGGTGTTCGACGA-CTT-ATGTA 171888
Query 187458 TAAA-AAAGACCGCAAAGATAAATTTCCAATTTTGAGAGCTATTTTAGCTCAACTTAGAC 187516
|||| ||| | || || | ||| ||||||||| | || |||||||| ||| ||||||
Sbjct 171889 TAAAGAAAAATCGAAATGCTAAGTTTCCAATTCTTCAAGTTATTTTAGGCCAAATTAGAC 171948
Query 187517 CAGAAATTAAATTA 187530
||||||||||| ||
Sbjct 171949 CAGAAATTAAACTA 171962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658020025797680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |