Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq738 360 2e-94
seq2120 187 3e-42
>seq738
Length=407637
Score = 360 bits (398), Expect = 2e-94
Identities = 614/878 (70%), Gaps = 13/878 (1%)
Strand=Plus/Plus
Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTT-TCCCTCTAATGATATAC 18727
|||||||||||| || || |||||||||||||| || || | || ||||| |||
Sbjct 114299 TTTTTGATATTCACTCACCCTCTTTTCAAAGAAATTTGTCTTATTAATC-AATGAAATAT 114357
Query 18728 ATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATA 18787
||||| ||||| || ||||| | ||||| || || ||| |||| | ||| | ||
Sbjct 114358 TATCCATGAAATCCAAAGGATTATGAACATTGTAAATCTTTGAATATCCAAGTTCAATTA 114417
Query 18788 GTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCA-CAATTCATTCCTATT 18846
|| |||||| || |||||| | ||||| | |||| | || | ||||||| ||||
Sbjct 114418 ATAATCTATCAGCAACAAATCTTATATAATTAATCAT-AGATGAGCAATTCAAACCTAAA 114476
Query 18847 AATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATA 18906
| || ||| |||| || ||||| ||||||||| ||| |||| ||||| || |||
Sbjct 114477 ATTTCAACGGGTAATGACTCTGTCAGAAATTCTCCTTCAATATCAACTGCTTCCTGTATT 114536
Query 18907 ATAGA-TACAACTCT--ATCT--TCATTAGGAGGGTATAGAAGATGTT-TAAACATCAAA 18960
|| || || | || | ||| | ||| | | | || || || | || | | | |
Sbjct 114537 ATTGAATAAACCTTTGAATCAGATAATTT--ATGTTTTA-AATATTTCCTATATAAGAGA 114593
Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020
|||||||| |||||||||| |||| ||||||||||| | ||||||| || ||||||
Sbjct 114594 CATGCAAATTCACAATGTAAGGCCTCATCTCTACTTATAAGTTCATTACTGAAAGTTAAA 114653
Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAAT 19080
|| ||||| | | ||||| ||||| ||||| | ||||| ||||| |||||
Sbjct 114654 CCTGGCATAATATTACGCTTTTTCAACCAAAATATTGCTGCAAAACTCCCAGAGAAGAAA 114713
Query 19081 ATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA 19140
|| ||||| || ||||||| || || | || ||| | |||| | || | || ||
Sbjct 114714 ATCCCTTCAACCACTGCAAACGCTACCAATCGCTCTGCGAAACTTGAATTTTGATCATAT 114773
Query 19141 ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTA 19200
|| |||| |||||| |||| ||| ||| | || || |||||||| | |||
Sbjct 114774 ATATATTTATTTGCCCATATTCCCTTTTTTCTTATTGAAGGGATGGTCTCTATTGCGTTA 114833
Query 19201 AATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATT 19260
|| |||| | || ||||||| || | | | |||| ||||| || |||||
Sbjct 114834 AAAAGATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAATAATAAGCTATACATC 114893
Query 19261 TCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATC 19320
|||||||| |||||||| |||| | ||||| | ||| ||| |||| ||||| | ||
Sbjct 114894 TCTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAATCTAGCTTCAATGATT 114953
Query 19321 TGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCA 19380
|||||||| | |||||||| | |||||| ||| ||| ||| ||| | |||
Sbjct 114954 TGTACTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATTGTATCTGATGAAGCA 115013
Query 19381 AAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATTCCAATCA 19440
|||||||| | | |||| |||||||||||||||||||| || | | ||||||| |
Sbjct 115014 AAAAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTCAGCTTCTTCCAATGA 115073
Query 19441 TTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTA 19500
||||||| ||||||| ||| || ||||| ||||||||||| || | | || ||||
Sbjct 115074 GTAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAAAAAGATGCTACAGATTGTTTA 115133
Query 19501 TACATGTTCCATATATCACGATATTGTATAGGAAATAT 19538
||| ||| ||||||||| | ||| ||| ||||||||
Sbjct 115134 TACTTGTACCATATATCGGGGTATAATATTGGAAATAT 115171
Score = 298 bits (330), Expect = 6e-76
Identities = 1174/1827 (64%), Gaps = 75/1827 (4%)
Strand=Plus/Plus
Query 47009 TTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCAT 47068
|| ||||| ||||||||||| |||||||| || || | ||||| ||| ||||| |
Sbjct 382841 TTGTGTTCTGAAATAATACATTCCAGTCTTCAATCCAGATTTCCATGTATAAAAATGAAG 382900
Query 47069 ACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATC 47128
|||||| || | |||| ||| ||||| | || || |||||
Sbjct 382901 TGAGCATAATTTTTCATGCGTTGGTTTATTCATAAATATATTCAATGACTGCGATTGATC 382960
Query 47129 AATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATAC 47188
|||||| | |||||||| |||||||| | || | | || | |||||||||||
Sbjct 382961 AATAAACGGTGCTCTATCAATAGCCATATCAACAAGTGTCTTCTGAGAAATCTCCCATAC 383020
Query 47189 TGTTTTATAA-ATTTGTT----TAATGTCTTCTGGGAGATTAGTATTTTGAATAGATCCT 47243
|||| ||||| |||| || ||| | | | | ||| |||||||||| |||||
Sbjct 383021 TGTTCTATAACATTTCTTCAGATAAGAAGGTATCG-ATTTTA-TATTTTGAATTGATCCA 383078
Query 47244 CCgttttctataattt--tgttt--tttaattcatttgaccaaagttttcgttcagttaa 47299
||| ||||||| ||| | ||| || |||| |||||| | | | ||
Sbjct 383079 TTGTTCCTCATAATTTCTTGTCTCATTTTAT-CATT---CCAAAGCCCAGCCTGAATCAA 383134
Query 47300 tgtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATA 47359
||| | | || ||| | ||| ||||| | ||||||| || | ||||
Sbjct 383135 ATCTTTCATTAAATATTTATTTATAATCTGAAACTGACCAGATAAAACCTGTCTTGTATA 383194
Query 47360 TATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGC 47419
||||| || |||||| || ||||||| ||| || |||||||| | ||| |||||
Sbjct 383195 AATATTTGAAGTTATTGGTTCAATTGATTCATAATTGCCTAAAATTTGTGAAGTGGATGC 383254
Query 47420 TGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTT-TG-TATCTNNNNN 47477
|||||||| ||||| ||||| |||| | ||||||||| || |||||
Sbjct 383255 GGTAGGCATTTGTGCAATTAATAGAGAGTTTCGAATTCCATATTTACTGATATCTTTTTT 383314
Query 47478 NNNNNNNGTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGA 47537
| |||||| || | || || |||||| | |||||| || | |
Sbjct 383315 CAGATTA--TCCCAATCAAGAAACTGGGAGGGTTGTTTATTCCATAGATCATACTGCAAA 383372
Query 47538 ATTCCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGT 47597
| || || || | ||| |||| |||| | ||| | || | | |||| |||
Sbjct 383373 AAGCCCTTGCTGAGTGGACTACCAATATAACTGGGATATTGTCCATCATTTCTAGCAAGT 383432
Query 47598 TCACAACTTGCTTCCA---ATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGA 47654
||||| |||||||| | ||||| ||||| | |||||||||||||| | || |
Sbjct 383433 TCACAGCTTGCTTCAAGAGATGCA---TAATAGAGAGTTTCAAATATTTTCTTATTCAAT 383489
Query 47655 TTCCTTGCTTCTGATGATT--CAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATC 47712
| | | |||| | | | || | || ||| ||| || || |
Sbjct 383490 TGGATAGATTCT--TCACTGCCATATGGTATTTTTAAAATCATGAATAGATCAGCTAAAC 383547
Query 47713 CTTGAACACCAATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATG 47772
| |||| || || ||||| ||||||| ||||||| ||||| || | |||| | ||
Sbjct 383548 CCTGAATTCCGATCCCAATAGGTCTATTTTTTTTATTTGAAAATTCTGTAGCTGGGATTG 383607
Query 47773 GATATTTGTTTATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTC 47832
||| | || ||||| || | |||||||||| || | ||
Sbjct 383608 TATAATAATTCATATCGATTAATTTATTTAGATTTTGTGTAACAACTTTTGTAACCTGTC 383667
Query 47833 TTAATTTATTAAAATCAAAC---TTGTTATTTATAAC---AAACCTATTAAGTGCTATAG 47886
| ||||||| ||||||||| || | ||| ||| ||| |||||| |||||| |
Sbjct 383668 TCAATTTATAAAAATCAAATACATTATCATTGGGAACTATAAATTTATTAACTGCTATGG 383727
Query 47887 ATGCTAGATTACATACAGCTACCTCAT--TTGGATTAGTATATTGTATTATTTCAGCACA 47944
| || |||||||| || || | |||| || ||| | | |||||| ||||||| |||
Sbjct 383728 AAGCAAGATTACAGACTGCAATTTCATCTTTTGATGA--AAATTGTACAATTTCAGTACA 383785
Query 47945 TAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCG-T 48003
|| |||| ||||| || || |||||||| || ||| | ||| || | |
Sbjct 383786 TAAGTTACTGCATTTTATGGTTCCCAAATTAATTTGGTTAGACTTTCTATTA-ATACTAT 383844
Query 48004 CCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCA-A 48062
|||| | | |||| | ||| ||||||||| || ||| ||||| || |||| |
Sbjct 383845 CCTTAAATAACATATAGGGTAATCCAGTTTCAATTTGACTATCAATTAT---TTTCATGA 383901
Query 48063 ACAGTCCTA--GCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATA 48120
||| | || || | ||| | | | | || || ||||| |||| |||||
Sbjct 383902 ACAATTCTCTTGCATCTATTTGTTCCAAATATCTCTTTTCTTGTTCATATTGTCCATATA 383961
Query 48121 ACTTCTCAAATTCAT--CCCCATACACATTATCTAACCCAGGACATTCATTAGGACACAT 48178
||||| |||| ||||| || | || | ||||||| ||| ||||||||
Sbjct 383962 GTAATTCAAACTCATTACCCCAAACGTCTGATAGATTT--GGACATTGATTTGGACACAT 384019
Query 48179 CAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGC 48238
|| |||| |||| ||||| || |||| |||||||| ||| | | ||||||| |
Sbjct 384020 TAAACTCCAAATTTCATTATTTTCCACCCTAGACATAAATAGATCAGACAACCAAAGACC 384079
Query 48239 TATA-AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTT-AAGTTCAAGA 48296
||| |||||||| || | ||| ||||| ||||||||| |||| |||| || ||||| |
Sbjct 384080 -ATAGAATAAATCTCTTGCTCTAAGTTCATCATTGCCAATATTTTTTTTCAAATTCAA-A 384137
Query 48297 AAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTA 48356
|| | || |||||| |||||||| |||||||| ||||| || | |||||||| ||
Sbjct 384138 AATTTCAAAATATCAATATGCCATGACTCTAAATAGATTGCAATGGCCCCTGGTCGCTTC 384197
Query 48357 TTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATA 48416
||||| ||||| | |||| ||| | ||| | | | | | | | | |
Sbjct 384198 ---CCTCCCTGATCAACCAATCTCACAGAGCTATTAAATAAACGAATTGTAGAAATTAGA 384254
Query 48417 CCATTTGATATACCATTGGTTCCCGAAAT---ATAACTTCCACTAGCTCTTATATTACTA 48473
|||||||| | ||| || | |||| || | | | | ||| | ||| |
Sbjct 384255 CCATTTGAAACCCCA--GGAT----AAATTTTATCATTATCTGTTGCTTTGATACAATGT 384308
Query 48474 ATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCA 48533
| | | ||| || ||||| ||| |||||||||| |||||| ||| || ||||||
Sbjct 384309 AAAGCTAAACCAATTCCACCCATCATATTAGATATTAAAGCACAATTTTTGAGTGTATCA 384368
Query 48534 TAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGA 48593
||||| || || |||| | || | |||||| ||||||||| | || |||| |
Sbjct 384369 TAAATATTGTCAATTGAATCACTTTCCAAAGTTAATAAAAAACAACTTGCCAATTGCTGC 384428
Query 48594 TGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAAC 48653
|| ||| | || ||| | || ||| |||| ||||||| | | |||| | |||||
Sbjct 384429 TGTGGAGTACATGCATTTATTAGTGTAGGAGTTGCATGAGTGTAATATTTTTGTGATAGA 384488
Query 48654 AATTTATATGTTTCAATAACAGAATCTATATC----CCATTGATGTATACCTATAGATAC 48709
| | ||| ||||| | | || |||| ||||| ||||| || |||||
Sbjct 384489 AGATCATAGGTTTCTCTTATTTTGTCAATATTGTTACCATT----TATACTTACCGATAC 384544
Query 48710 ACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGA 48769
| ||| ||||||| |||||||||||||| ||| |||| ||||||| || |||||
Sbjct 384545 TCTCATAAACATATGTTGAGGTCTTTCAATAATAACATTATCAATTTTCATTAGGTATGA 384604
Query 48770 TTTTTCCAATGTTTTAAAACCAAAATA 48796
| |||| ||||||||| | ||||||||
Sbjct 384605 TGTTTCTAATGTTTTATATCCAAAATA 384631
>seq2120
Length=154726
Score = 187 bits (206), Expect = 3e-42
Identities = 253/353 (72%), Gaps = 0/353 (0%)
Strand=Plus/Minus
Query 19186 GTCTCTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATC 19245
|||||||| | ||||| |||| | || ||||||| || | | | ||||
Sbjct 146121 GTCTCTATTGCGTTAAAAAGATGATTCTTCTGATCTGTAGATTCTATGAAAGTTTCTAAT 146062
Query 19246 AATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACAT 19305
||||| || ||||| |||||||| |||||||| |||| | ||||| | ||| ||| ||
Sbjct 146061 AATAAGCTATACATCTCTGAATGTATATTTTCCATAGTTAATTGAAAACTGTAGAAAAAT 146002
Query 19306 CTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATT 19365
|| ||||| | || |||||||| | |||||||| | |||||| ||| ||| |||
Sbjct 146001 CTAGCTTCAATGATTTGTACTTCTTGAATGAATCTTTCAATCAAATTATCACCAACAATT 145942
Query 19366 CCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTT 19425
||| | ||||||||||| | | |||| |||||||||||||||||||| ||
Sbjct 145941 GTATCTGATGAAGCAAAAAATGCAAGAATATGTGATATAAAATGTTTTTCATCTGATGTC 145882
Query 19426 AATGTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAA 19485
| | ||||||| | ||||||| ||||||| ||| || ||||| ||||| |||||
Sbjct 145881 AGCTTCTTCCAATGAGTAATATCCTTAGATAGATCGACCTCTTCTGTGGTCCAGAAAGAT 145822
Query 19486 GCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATAT 19538
|| | | || ||||||| ||| ||||||||| | ||| ||| | ||||||
Sbjct 145821 GCTACAGATTGTTTATACTTGTACCATATATCGGGGTATAATATTGAAAATAT 145769
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561781666731120
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