Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq738 264 1e-65
>seq738
Length=407637
Score = 264 bits (292), Expect = 1e-65
Identities = 427/611 (70%), Gaps = 11/611 (2%)
Strand=Plus/Plus
Query 37151 ATATTTTAAATATTT---AAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCT 37207
|| |||||||||||| | | || | ||||||||| ||||||||||| | ||||||||
Sbjct 114566 ATGTTTTAAATATTTCCTATATAAGAGACATGCAAATTCACAATGTAAGGCCTCATCTCT 114625
Query 37208 ACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAA 37267
|||||| | ||||||| || ||||| |||||||| | | | ||||| | ||||||
Sbjct 114626 ACTTATAAGTTCATTACTGAAAGTTAAACCTGGCATAATATTACGCTTTTTCAACCAAAA 114685
Query 37268 TATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACG 37327
||||||||||||| ||||| |||||||| |||||||| ||||||| ||||| | ||
Sbjct 114686 TATTGCTGCAAAACTCCCAGAGAAGAAAATCCCTTCAACCACTGCAAACGCTACCAATCG 114745
Query 37328 TGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTT 37387
||||| ||||| | | |||| | || |||| |||| ||| | ||||| |||
Sbjct 114746 CTCTGCGAAACTTGAATTTTGATCATATATATATTTATTTGCCCATATTCCCTTT--TTT 114803
Query 37388 AACACATTCA----ATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTG 37443
| ||| | || || || ||||| || || ||| || || | || || |
Sbjct 114804 --CTTATTGAAGGGATGGTCTCTATTGCGTTAAAAAGATGATTCTTCTGATCTGTAGATT 114861
Query 37444 TTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCT 37503
||| |||| || | || ||| |||||||| || || || |||||||| |||| || |
Sbjct 114862 CTATGAAAGTTTCTAATAATAAGCTATACATCTCTGAATGTATATTTTCCATAGTTAATT 114921
Query 37504 GAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTA 37563
|||||| || ||| | ||||||||| | ||| || || | || || || | | |
Sbjct 114922 GAAAACTGTAGAAAAATCTAGCTTCAATGATTTGTACTTCTTGAATGAATCTTTCAATCA 114981
Query 37564 AGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAAT 37623
| || ||| ||| || ||| | ||||| || ||||||| || | ||||||||
Sbjct 114982 AATTATCACCAACAATTGTATCTGATGAAGCAAAAAATGCAAGAATATGTGATATAAAAT 115041
Query 37624 GTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCAT 37683
|| ||||||| || | || ||||||| | ||||||| || |||| ||| || || |
Sbjct 115042 GTTTTTCATCTGATGTCAGCTTCTTCCAATGAGTAATATCCTTAGATAGATCGACCTCTT 115101
Query 37684 CAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTA 37743
| |||||||||| ||| | | |||||||| | ||| ||||| | | ||
Sbjct 115102 CTGTGGTCCAAAAAGATGCTACAGATTGTTTATACTTGTACCATATATCGGGGTATAATA 115161
Query 37744 TTGGAAATATT 37754
|||||||||||
Sbjct 115162 TTGGAAATATT 115172
Score = 120 bits (132), Expect = 4e-22
Identities = 173/244 (71%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 78233 TGTTATTGGAATTGATGAAGGTCAATTTTTTAATGATATAGTGGAATTTTCTGAAAATAT 78292
||||||| | || ||||| || |||||||| |||| | || ||||||| ||||| ||
Sbjct 154908 TGTTATTTGTATAGATGAGGGACAATTTTTCGTTGATGTGGTAGAATTTTGTGAAATGAT 154967
Query 78293 GGCAAATAAAGGAAAAATTGTTATTGTTTCGGCATTAGATGCTACATATCAAAGAAAAAC 78352
| | ||| || |||||| |||| || | | | ||||| | |||| | | ||| |
Sbjct 154968 GATAGGTAATGGGAAAATTATTATAGTCGCTGGTCTTGATGCAAAATATAATATGAAACC 155027
Query 78353 ATTTGGTAATATTCTAAATTTAATTCCATTATCTGAAAAGGTAATAAAATTAAATGCTAT 78412
|||| |||||| | ||| | |||||| |||| |||||||| |||||| ||| ||
Sbjct 155028 TTTTGAAAATATTATCAATCTTATTCCAATATCCGAAAAGGTTGATAAATTATCTGCAAT 155087
Query 78413 ATGTAAAATATGTTTTAATGATGCTGCATTTACAAAAAGATTATGTGACGATACTAAAAT 78472
||| | || ||| ||| ||||| ||||||||||||||| | ||| |||| |
Sbjct 155088 TTGTTACATTTGTAATAAAGATGCATATTTTACAAAAAGATTAATACATGATGATAAACT 155147
Query 78473 TGAA 78476
||||
Sbjct 155148 TGAA 155151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 591972086430320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |