Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1320 138 9e-28 seq1095 136 3e-27 seq738 96.9 3e-15 >seq1320 Length=267419 Score = 138 bits (152), Expect = 9e-28 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||| | ||| | || | ||| || || ||||| || || ||||| || |||| Sbjct 95659 TTCCTCCTCTAAGACGGAGTACGAGATGGAGAGTTGATTCCTTCTGGATATTATAGTCGG 95600 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | | || ||||| ||||| ||||| || |||| |||||| || || || | Sbjct 95599 ACAGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTG 95540 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| || || ||||| || ||||| || ||| | || | |||||||| | || | Sbjct 95539 GAATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGAAGGCTCGA 95480 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||||||| || ||||| || | ||||| ||||| |||||||| Sbjct 95479 CTTCAAGAGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAAATCTGCAT 95431 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||| | ||| | || | ||| || || ||||| || || ||||| || |||| Sbjct 95887 TTCCTCCTCTAAGACGGAGTACGAGATGGAGAGTTGATTCCTTCTGGATATTATAGTCGG 95828 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | | || ||||| ||||| ||||| || |||| |||||| || || || | Sbjct 95827 ACAGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTG 95768 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| || || ||||| || ||||| || ||| | || | |||||||| | || | Sbjct 95767 GAATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGATGGCTCGA 95708 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||||||| || ||||| || | || || || || |||||||| Sbjct 95707 CTTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCAT 95659 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||| | ||| | || | ||| || || ||||| || || ||||| || |||| Sbjct 96115 TTCCTCCTCTAAGACGGAGTACGAGATGGAGAGTTGATTCCTTCTGGATATTATAGTCGG 96056 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | | || ||||| ||||| ||||| || |||| |||||| || || || | Sbjct 96055 ACAGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTG 95996 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| || || ||||| || ||||| || ||| | || | |||||||| | || | Sbjct 95995 GAATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGAAGGCTCGA 95936 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||||||| || ||||| || | || || || || |||||||| Sbjct 95935 CTTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCAT 95887 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||||||||| | ||| | || | ||| || || ||||| || || ||||| || |||| Sbjct 96343 TTCCTCCTCTAAGACGGAGTACGAGATGGAGAGTTGATTCCTTCTGGATATTATAGTCGG 96284 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | | || ||||| ||||| ||||| || |||| |||||| || || || | Sbjct 96283 ACAGAGTACGACCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTG 96224 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| || || ||||| || ||||| || ||| | || | |||||||| | || | Sbjct 96223 GAATTCCCTCCTTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGAAGGCTCGA 96164 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||||||| || ||||| || | || || || || |||||||| Sbjct 96163 CTTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCAT 96115 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| || || || || || || ||||| || |||| | ||| | | || ||||| || Sbjct 96546 ATGGAGAGTGGACTCCTTCTGGATATTATAGTCGGACAGAGTACGACCGTCTTCCAACTG 96487 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| ||||| || |||| |||||| || || || ||||| || || ||||| || ||||| Sbjct 96486 CTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTGGAATTCCCTCCTTATCCTGGATTTT 96427 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | |||||||| | || ||||||||||||| || ||||| || Sbjct 96426 CGCCTTCACATTCTCAATGGTGTCAGATGGCTCGACTTCAAGAGTGATGGTCTTGCCAGT 96367 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | || || || || |||||||| Sbjct 96366 CAGGGTCTTCACGAAAATCTGCAT 96343 >seq1095 Length=312686 Score = 136 bits (150), Expect = 3e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 ||||| || ||||| || ||||| ||||| || ||||| || | | ||| | | |||| Sbjct 81800 AAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCT 81741 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 || | ||||| || ||||| || | |||||| || || || || || ||||| || ||| Sbjct 81740 TCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCT 81681 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 || || || |||||| | || | ||| || || | ||| ||||| | ||||| || Sbjct 81680 TGGATCTTGGCCTTTACATTCTCGATAGTATCGGATGGTTCAACTTCCAAAGTGATGGTC 81621 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 |||||||| | ||||||||| |||||||||||| Sbjct 81620 TTGCCGGTCAGAGTTTTTACGAATATCTGCATG 81588 Score = 136 bits (150), Expect = 3e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 ||||| || ||||| || ||||| ||||| || ||||| || | | ||| | | |||| Sbjct 88621 AAAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCT 88562 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 || | ||||| || ||||| || | |||||| || || || || || ||||| || ||| Sbjct 88561 TCAAGCTGCTTTCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCT 88502 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 || || || |||||| | || | ||| || || | ||| ||||| | ||||| || Sbjct 88501 TGGATCTTGGCCTTTACATTCTCGATAGTATCGGATGGTTCAACTTCCAAAGTGATGGTC 88442 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 |||||||| | ||||||||| |||||||||||| Sbjct 88441 TTGCCGGTCAGAGTTTTTACGAATATCTGCATG 88409 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||| | | ||| || || | || || ||||||||||| || || ||||| || | Sbjct 89094 TTCCTCCACGAAGACGCAACACAAGGTGGAGAGTAGATTCTTTCTGGATGTTGTAGTCAG 89035 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | || || |||| |||| ||||| || || || || | |||||| || ||||| | Sbjct 89034 ACAGTGTCCTTCCATCCTCCAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGGTCGGGTG 88975 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || || || || |||||||| || || || | || | |||||||| | ||| | Sbjct 88974 GGATTCCCTCCTTGTCTTGAATCTTAGCCTTCACGTTCTCAATCGTGTCAGAGGGTTCAA 88915 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| | |||| ||||||||||| | ||||||||| || || ||||| Sbjct 88914 CTTCCAATGTGATGGTTTTGCCGGTCAGAGTTTTTACGAAGATTTGCAT 88866 Score = 114 bits (126), Expect = 1e-20 Identities = 159/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| || || || |||||||||||||| || ||||| || | | ||||| |||| || Sbjct 90671 AACCAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAGTCAGACAGGGTTCTACCATCCTC 90612 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 || |||||| || || || || | | ||| || ||||| ||||| || || || ||||| Sbjct 90611 CAGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTGGAATTCCCTCCTTGTCTTG 90552 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || || || |||| | || || || | |||||||| | |||| || || Sbjct 90551 GATCTTGGCCTTCACGTTTTCAATGGTATCGGAGGGCTCCACTTCCAAGGTGATGGTCTT 90492 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 |||||| | ||| |||||||| || ||||| | | |||||| Sbjct 90491 GCCGGTCAGAGTCTTTACAAAGATTTGCATTCCTCCACGAAGA 90449 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| || || | ||| || || |||||||| || |||||||| || | | || ||| | Sbjct 81576 ACGCAACACAAGATGGAGAGTGGATTCTTTCTGAATATTGTAGTCTGACAATGTCCTGCC 81517 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| |||| || ||||| || || || | ||||| || || || || || ||||| || Sbjct 81516 ATCCTCCAGCTGTTTACCAGCGAAAATGAGGCGCTGCTGGTCAGGTGGGATTCCTTCCTT 81457 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||||||| || || ||| | || | ||||| || | ||||| || | || | Sbjct 81456 ATCTTGAATCTTGGCCTTCACATTCTCAATCGTGTCTGAGGGCTCCACCTCCAATGTAAT 81397 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || || ||||| || ||||||||||| Sbjct 81396 GGTCTTTCCTGTCAACGTTTTCACGAATATCTGCAT 81361 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| || || | ||| || || |||||||| || |||||||| || | | || ||| | Sbjct 88397 ACGCAACACAAGATGGAGAGTGGATTCTTTCTGAATATTGTAGTCTGACAATGTCCTGCC 88338 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| |||| || ||||| || || || | ||||| || || || || || ||||| || Sbjct 88337 ATCCTCCAGCTGTTTACCAGCGAAAATGAGGCGCTGCTGGTCAGGTGGGATTCCTTCCTT 88278 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||||||| || || ||| | || | ||||| || | ||||| || | || | Sbjct 88277 ATCTTGAATCTTGGCCTTCACATTCTCAATCGTGTCTGAGGGCTCCACCTCCAATGTAAT 88218 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || || ||||| || ||||||||||| Sbjct 88217 GGTCTTTCCTGTCAACGTTTTCACGAATATCTGCAT 88182 >seq738 Length=407637 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101257 TAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATC 101316 |||||| | ||| | || || || ||||||||||| ||||| | ||| | ||| Sbjct 219687 TAAAACCAGATGCAATGTTGAATCCTTTTGTATATTATAATCCATTACGAATCTTGAATC 219628 Query 101317 GTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATC 101376 || |||||||| |||| |||||| | ||| |||||||| ||||| ||||||||||| Sbjct 219627 TTCTAATTGCTTTCCTGAAAATATGAGACGTTGTTGATCTATTGGAATACCTTCTTTATC 219568 Query 101377 TTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGT 101436 || || | | ||||| | ||| || |||| | || | |||| |||| || Sbjct 219567 TTTTATATACTCTTTTATTAGAGCTATTGTATCAGTTGATTTAATATCAATTGTGATTGT 219508 Query 101437 TTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | | || || | ||| | |||||||||||||| Sbjct 219507 TCTCCCAGTAAGTGTTCTAACAAATATCTGCAT 219475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396053541481206