Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1095 120 2e-22 seq10469 91.5 1e-13 seq1320 87.8 1e-12 >seq1095 Length=312686 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 48551 CCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATC 48610 || || |||||| || || ||| ||| || || || ||||| ||||| || ||| | Sbjct 84682 CCTCAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTTCTGCC 84623 Query 48611 GTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTT 48670 || || | |||||| |||||||| || |||| ||| || || | |||| |||||||| Sbjct 84622 ATCCTCGAGCTGCTTTCCGGCAAAGATGAGTCTCTGCTGGTCGGGTGGAATTCCCTCCTT 84563 Query 48671 GTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAAT 48730 ||| ||||| |||||| | | | || |||| ||||||||||| |||||| Sbjct 84562 GTCTTGGATCTTGGCCTTTACATTCTCAATCGTGTCCGACGGCTCCACCTCCAACGTAAT 84503 Query 48731 CGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||| ||||| ||||| |||||||| Sbjct 84502 TGTCTTGCCGGTCAACGTTTTCACAAAGATCTGCAT 84467 Score = 109 bits (120), Expect = 4e-19 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 |||| || || ||||| ||||| || ||| | || || | |||||| |||||||| | Sbjct 78073 CTTTCTGGATGTTGTAGTCAGACAGGGTTCTGCCATCTTCGAGCTGCTTTCCGGCAAAAA 78014 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696 | |||| ||| || || | |||| ||||||||||| ||||| |||||| Sbjct 78013 TAAGTCTCTGCTGGTCGGGTGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTTACATTCT 77954 Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756 | | | || |||| ||||||||||| |||||| || || || ||||| ||||| |||| Sbjct 77953 CAATCGTGTCCGACGGCTCCACCTCCAACGTAATTGTCTTGCCGGTCAACGTTTTCACAA 77894 Query 48757 AAATCTGCAT 48766 | |||||||| Sbjct 77893 AGATCTGCAT 77884 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| |||||| || || || || || ||||||||||| || ||||| ||| | Sbjct 82034 AGTCGCAGCACCAAGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCTGATAGTGTTCTA 81975 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| ||||| || || || || |||| ||| || || | |||| || ||| Sbjct 81974 CCATCTTCCAGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTGGAATTCCTTCC 81915 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || ||||| || ||| | | || ||||| | || || |||| || Sbjct 81914 TTATCTTGGATCTTAGCCTTGACATTCTCAATAGTATCTGAAGGTTCAACTTCCAGGGTG 81855 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| ||||| ||||| |||||||||||||| Sbjct 81854 ATGGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGCAT 81817 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| |||||| || || || || || ||||||||||| || ||||| ||| | Sbjct 88855 AGTCGCAGCACCAAGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCTGATAGTGTTCTA 88796 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| ||||| || || || || |||| ||| || || | |||| || ||| Sbjct 88795 CCATCTTCCAGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTGGAATTCCTTCC 88736 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || ||||| || ||| | | || ||||| | || || |||| || Sbjct 88735 TTATCTTGGATCTTAGCCTTGACATTCTCAATAGTATCTGAAGGTTCAACTTCCAGGGTG 88676 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| ||||| ||||| |||||||||||||| Sbjct 88675 ATGGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGCAT 88638 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||| | ||| || ||| ||||| ||||||||||| || || | | | Sbjct 81578 AGACGCAACACAAGATGGAGAGTGGATTCTTTCTGAATATTGTAGTCTGACAATGTCCTG 81519 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| ||| ||||| || || || || ||||| || || | || | || ||| Sbjct 81518 CCATCCTCCAGCTGTTTACCAGCGAAAATGAGGCGCTGCTGGTCAGGTGGGATTCCTTCC 81459 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || |||||| || ||| | | | ||||| | ||||||||||| ||| Sbjct 81458 TTATCTTGAATCTTGGCCTTCACATTCTCAATCGTGTCTGAGGGCTCCACCTCCAATGTA 81399 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| ||||| ||||| || || |||||||| Sbjct 81398 ATGGTCTTTCCTGTCAACGTTTTCACGAATATCTGCAT 81361 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||| | ||| || ||| ||||| ||||||||||| || || | | | Sbjct 88399 AGACGCAACACAAGATGGAGAGTGGATTCTTTCTGAATATTGTAGTCTGACAATGTCCTG 88340 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| ||| ||||| || || || || ||||| || || | || | || ||| Sbjct 88339 CCATCCTCCAGCTGTTTACCAGCGAAAATGAGGCGCTGCTGGTCAGGTGGGATTCCTTCC 88280 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || |||||| || ||| | | | ||||| | ||||||||||| ||| Sbjct 88279 TTATCTTGAATCTTGGCCTTCACATTCTCAATCGTGTCTGAGGGCTCCACCTCCAATGTA 88220 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| ||||| ||||| || || |||||||| Sbjct 88219 ATGGTCTTTCCTGTCAACGTTTTCACGAATATCTGCAT 88182 Score = 82.4 bits (90), Expect = 6e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 |||| ||||||||||| || || || | || | || || | |||||| || || || | Sbjct 79335 CTTTCTGAATATTGTAGTCGGACAGGGTACGGCCATCTTCAAGCTGCTTTCCAGCGAAAA 79276 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696 | || ||||| ||||| | || | ||||||||||| ||||| || || Sbjct 79275 TGAGACGCTGCTGATCGGGTGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTTT 79216 Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756 | | | ||||| | |||||| |||| ||| || || ||||| ||||| || || |||| Sbjct 79215 CAATGGTGTCTGAGGGCTCCACTTCCAACGTGATGGTCTTTCCAGTCAACGTCTTGACAA 79156 Query 48757 AAATCTGCAT 48766 | || ||||| Sbjct 79155 AGATTTGCAT 79146 Score = 82.4 bits (90), Expect = 6e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 |||| ||||||||||| || || || | || | || || | |||||| || || || | Sbjct 86156 CTTTCTGAATATTGTAGTCGGACAGGGTACGGCCATCTTCAAGCTGCTTTCCAGCGAAAA 86097 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696 | || ||||| ||||| | || | ||||||||||| ||||| || || Sbjct 86096 TGAGACGCTGCTGATCGGGTGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTTT 86037 Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756 | | | ||||| | |||||| |||| ||| || || ||||| ||||| || || |||| Sbjct 86036 CAATGGTGTCTGAGGGCTCCACTTCCAACGTGATGGTCTTTCCAGTCAACGTCTTGACAA 85977 Query 48757 AAATCTGCAT 48766 | || ||||| Sbjct 85976 AGATTTGCAT 85967 >seq10469 Length=3016 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 |||| ||||||||||| ||||| || | || | || || | |||||| || || || | Sbjct 934 CTTTCTGAATATTGTAGTCAGACAGGGTACGGCCATCTTCAAGCTGCTTTCCAGCGAAAA 875 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696 | || ||||| ||||| | || | ||||||||||| ||||| || || Sbjct 874 TGAGACGCTGCTGATCGGGTGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTTT 815 Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756 | | | ||||||| |||||| |||| ||||| || ||||| ||||| || || |||| Sbjct 814 CAATGGTGTCTGACGGCTCCACTTCCAATGTAATGGTCTTTCCAGTCAACGTCTTGACAA 755 Query 48757 AAATCTGCAT 48766 | || ||||| Sbjct 754 AGATTTGCAT 745 >seq1320 Length=267419 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||||| ||| || ||| ||| || || ||||| || || || ||| | ||| Sbjct 96560 AGACGCAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTATAGTCGGACAGAGTACGA 96501 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| ||||||||||| || || || ||||| ||||| || || | |||| |||||| Sbjct 96500 CCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTGGAATTCCCTCC 96441 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || || || || ||| | | | || || | ||| || || | || Sbjct 96440 TTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGATGGCTCGACTTCAAGAGTG 96381 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || |||| || || || ||||||||||| Sbjct 96380 ATGGTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCAT 96343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380721446244234