Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq1095 120 2e-22
seq10469 91.5 1e-13
seq1320 87.8 1e-12
>seq1095
Length=312686
Score = 120 bits (132), Expect = 2e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 48551 CCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATC 48610
|| || |||||| || || ||| ||| || || || ||||| ||||| || ||| |
Sbjct 84682 CCTCAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTTCTGCC 84623
Query 48611 GTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTT 48670
|| || | |||||| |||||||| || |||| ||| || || | |||| ||||||||
Sbjct 84622 ATCCTCGAGCTGCTTTCCGGCAAAGATGAGTCTCTGCTGGTCGGGTGGAATTCCCTCCTT 84563
Query 48671 GTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAAT 48730
||| ||||| |||||| | | | || |||| ||||||||||| ||||||
Sbjct 84562 GTCTTGGATCTTGGCCTTTACATTCTCAATCGTGTCCGACGGCTCCACCTCCAACGTAAT 84503
Query 48731 CGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || ||||| ||||| ||||| ||||||||
Sbjct 84502 TGTCTTGCCGGTCAACGTTTTCACAAAGATCTGCAT 84467
Score = 109 bits (120), Expect = 4e-19
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636
|||| || || ||||| ||||| || ||| | || || | |||||| |||||||| |
Sbjct 78073 CTTTCTGGATGTTGTAGTCAGACAGGGTTCTGCCATCTTCGAGCTGCTTTCCGGCAAAAA 78014
Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696
| |||| ||| || || | |||| ||||||||||| ||||| ||||||
Sbjct 78013 TAAGTCTCTGCTGGTCGGGTGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTTACATTCT 77954
Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756
| | | || |||| ||||||||||| |||||| || || || ||||| ||||| ||||
Sbjct 77953 CAATCGTGTCCGACGGCTCCACCTCCAACGTAATTGTCTTGCCGGTCAACGTTTTCACAA 77894
Query 48757 AAATCTGCAT 48766
| ||||||||
Sbjct 77893 AGATCTGCAT 77884
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| |||||| || || || || || ||||||||||| || ||||| ||| |
Sbjct 82034 AGTCGCAGCACCAAGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCTGATAGTGTTCTA 81975
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| ||||| || || || || |||| ||| || || | |||| || |||
Sbjct 81974 CCATCTTCCAGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTGGAATTCCTTCC 81915
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
|| || ||||| || ||| | | || ||||| | || || |||| ||
Sbjct 81914 TTATCTTGGATCTTAGCCTTGACATTCTCAATAGTATCTGAAGGTTCAACTTCCAGGGTG 81855
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| |||||||| ||||| ||||| ||||||||||||||
Sbjct 81854 ATGGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGCAT 81817
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| |||||| || || || || || ||||||||||| || ||||| ||| |
Sbjct 88855 AGTCGCAGCACCAAGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCTGATAGTGTTCTA 88796
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| ||||| || || || || |||| ||| || || | |||| || |||
Sbjct 88795 CCATCTTCCAGTTGCTTTCCAGCGAAGATAAGTCTCTGCTGGTCGGGTGGAATTCCTTCC 88736
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
|| || ||||| || ||| | | || ||||| | || || |||| ||
Sbjct 88735 TTATCTTGGATCTTAGCCTTGACATTCTCAATAGTATCTGAAGGTTCAACTTCCAGGGTG 88676
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| |||||||| ||||| ||||| ||||||||||||||
Sbjct 88675 ATGGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGCAT 88638
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||||||| | ||| || ||| ||||| ||||||||||| || || | | |
Sbjct 81578 AGACGCAACACAAGATGGAGAGTGGATTCTTTCTGAATATTGTAGTCTGACAATGTCCTG 81519
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| ||| ||||| || || || || ||||| || || | || | || |||
Sbjct 81518 CCATCCTCCAGCTGTTTACCAGCGAAAATGAGGCGCTGCTGGTCAGGTGGGATTCCTTCC 81459
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
|| || |||||| || ||| | | | ||||| | ||||||||||| |||
Sbjct 81458 TTATCTTGAATCTTGGCCTTCACATTCTCAATCGTGTCTGAGGGCTCCACCTCCAATGTA 81399
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || ||||| ||||| ||||| || || ||||||||
Sbjct 81398 ATGGTCTTTCCTGTCAACGTTTTCACGAATATCTGCAT 81361
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||||||| | ||| || ||| ||||| ||||||||||| || || | | |
Sbjct 88399 AGACGCAACACAAGATGGAGAGTGGATTCTTTCTGAATATTGTAGTCTGACAATGTCCTG 88340
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| ||| ||||| || || || || ||||| || || | || | || |||
Sbjct 88339 CCATCCTCCAGCTGTTTACCAGCGAAAATGAGGCGCTGCTGGTCAGGTGGGATTCCTTCC 88280
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
|| || |||||| || ||| | | | ||||| | ||||||||||| |||
Sbjct 88279 TTATCTTGAATCTTGGCCTTCACATTCTCAATCGTGTCTGAGGGCTCCACCTCCAATGTA 88220
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || ||||| ||||| ||||| || || ||||||||
Sbjct 88219 ATGGTCTTTCCTGTCAACGTTTTCACGAATATCTGCAT 88182
Score = 82.4 bits (90), Expect = 6e-11
Identities = 132/190 (69%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636
|||| ||||||||||| || || || | || | || || | |||||| || || || |
Sbjct 79335 CTTTCTGAATATTGTAGTCGGACAGGGTACGGCCATCTTCAAGCTGCTTTCCAGCGAAAA 79276
Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696
| || ||||| ||||| | || | ||||||||||| ||||| || ||
Sbjct 79275 TGAGACGCTGCTGATCGGGTGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTTT 79216
Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756
| | | ||||| | |||||| |||| ||| || || ||||| ||||| || || ||||
Sbjct 79215 CAATGGTGTCTGAGGGCTCCACTTCCAACGTGATGGTCTTTCCAGTCAACGTCTTGACAA 79156
Query 48757 AAATCTGCAT 48766
| || |||||
Sbjct 79155 AGATTTGCAT 79146
Score = 82.4 bits (90), Expect = 6e-11
Identities = 132/190 (69%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636
|||| ||||||||||| || || || | || | || || | |||||| || || || |
Sbjct 86156 CTTTCTGAATATTGTAGTCGGACAGGGTACGGCCATCTTCAAGCTGCTTTCCAGCGAAAA 86097
Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696
| || ||||| ||||| | || | ||||||||||| ||||| || ||
Sbjct 86096 TGAGACGCTGCTGATCGGGTGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTTT 86037
Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756
| | | ||||| | |||||| |||| ||| || || ||||| ||||| || || ||||
Sbjct 86036 CAATGGTGTCTGAGGGCTCCACTTCCAACGTGATGGTCTTTCCAGTCAACGTCTTGACAA 85977
Query 48757 AAATCTGCAT 48766
| || |||||
Sbjct 85976 AGATTTGCAT 85967
>seq10469
Length=3016
Score = 91.5 bits (100), Expect = 1e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636
|||| ||||||||||| ||||| || | || | || || | |||||| || || || |
Sbjct 934 CTTTCTGAATATTGTAGTCAGACAGGGTACGGCCATCTTCAAGCTGCTTTCCAGCGAAAA 875
Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696
| || ||||| ||||| | || | ||||||||||| ||||| || ||
Sbjct 874 TGAGACGCTGCTGATCGGGTGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTTT 815
Query 48697 CCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAA 48756
| | | ||||||| |||||| |||| ||||| || ||||| ||||| || || ||||
Sbjct 814 CAATGGTGTCTGACGGCTCCACTTCCAATGTAATGGTCTTTCCAGTCAACGTCTTGACAA 755
Query 48757 AAATCTGCAT 48766
| || |||||
Sbjct 754 AGATTTGCAT 745
>seq1320
Length=267419
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| ||||| ||| || ||| ||| || || ||||| || || || ||| | |||
Sbjct 96560 AGACGCAGCACCAGATGGAGAGTGGACTCCTTCTGGATATTATAGTCGGACAGAGTACGA 96501
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| ||||||||||| || || || ||||| ||||| || || | |||| ||||||
Sbjct 96500 CCGTCTTCCAACTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCAGGTGGAATTCCCTCC 96441
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
|| || || || || ||| | | | || || | ||| || || | ||
Sbjct 96440 TTATCCTGGATTTTCGCCTTCACATTCTCAATGGTGTCAGATGGCTCGACTTCAAGAGTG 96381
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || |||| || || || |||||||||||
Sbjct 96380 ATGGTCTTGCCAGTCAGGGTCTTCACGAAAATCTGCAT 96343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380721446244234
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |