Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq293 104 4e-17 seq412 102 2e-16 >seq293 Length=664131 Score = 104 bits (114), Expect = 4e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 |||||||| | |||||| ||||||| |||||||| ||| || ||||||||||| ||| Sbjct 203974 GTGTACTCGACGATCTCTGTGCACAAATTGCTGCACTTGATTGTTCCCAGGTTCTGCTGG 204033 Query 213588 TTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGG 213647 || ||||| ||| || | |||||||||||||||||||| | || ||||| | ||| Sbjct 204034 TTGGACTTGCGGTTAGCGGCGTCCTTGTAGAGCATGTAGGGTGTGCCCGTCTCAATCTGC 204093 Query 213648 GA 213649 || Sbjct 204094 GA 204095 Score = 102 bits (112), Expect = 2e-16 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 213725 GTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGA-TGCGGGAC 213783 |||||| | | |||||| | ||||| || | || || |||||| ||||| || Sbjct 205482 GTAGAGTTTCTCGAATTCTTCACCCCAAACATCGGAGAGACCGGGACAGTCGTGCGG-AC 205540 Query 213784 ACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACA 213843 ||||||||||||| |||| | ||||| ||||||||||||| || ||||||| Sbjct 205541 ACATGAGGCTCCACATTTGGTCAGCCTCGACTCGTCGCATGAACAGGTCGGGCACCCACA 205600 Query 213844 GCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTA 213903 | ||| ||||| || | | | | ||| || ||||| ||| || ||| || | Sbjct 205601 GTGCGTAGAACAAATCGCGAGCTCGCACCTCCTCTTTTCCAGTGTTCTTCTTCAGGTCCA 205660 Query 213904 GAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGG 213958 | || || | | |||||||||||||||||||| |||||| || || ||||| || Sbjct 205661 GGAACTCGTAAACGTCCGCGTGCCACGGCTCCAGGTAGATCGCGAACGCGCCTGG 205715 >seq412 Length=567167 Score = 102 bits (112), Expect = 2e-16 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 48167 ATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATT 48226 || ||| | ||| |||| |||||||||||||| || | || || |||||||| || Sbjct 173426 ATAAGCTCATTGCTGAAGGTGAGACCAGGCATGAGACCACGCTTCTTAAGCCAGAATATG 173485 Query 48227 GCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCT 48286 | ||| || ||| ||||||||||||||||| || || |||||||| | | ||| Sbjct 173486 GACGCAAAGCTGCCCGAGAAGAAGATGCCCTCAACGGCGGCGAACGCCACAACTCGCTCG 173545 Query 48287 CCGAAAGAAGCGTTCTTGTCT-GAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGAT 48345 ||||| | || | ||| || | |||||| | ||||||||| |||||| |||| | Sbjct 173546 CCGAACGTGGCCGT-TTGGCTGGCGATCCACTGCAACGCCCAGTCCGCCTTCCTCTTAAC 173604 Query 48346 GCATGGCATCGTCTC 48360 || ||||| ||||| Sbjct 173605 ACACGGCATTGTCTC 173619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930990671198720