Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq293 104 4e-17
seq412 102 2e-16
>seq293
Length=664131
Score = 104 bits (114), Expect = 4e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587
|||||||| | |||||| ||||||| |||||||| ||| || ||||||||||| |||
Sbjct 203974 GTGTACTCGACGATCTCTGTGCACAAATTGCTGCACTTGATTGTTCCCAGGTTCTGCTGG 204033
Query 213588 TTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGG 213647
|| ||||| ||| || | |||||||||||||||||||| | || ||||| | |||
Sbjct 204034 TTGGACTTGCGGTTAGCGGCGTCCTTGTAGAGCATGTAGGGTGTGCCCGTCTCAATCTGC 204093
Query 213648 GA 213649
||
Sbjct 204094 GA 204095
Score = 102 bits (112), Expect = 2e-16
Identities = 165/235 (70%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 213725 GTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGA-TGCGGGAC 213783
|||||| | | |||||| | ||||| || | || || |||||| ||||| ||
Sbjct 205482 GTAGAGTTTCTCGAATTCTTCACCCCAAACATCGGAGAGACCGGGACAGTCGTGCGG-AC 205540
Query 213784 ACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACA 213843
||||||||||||| |||| | ||||| ||||||||||||| || |||||||
Sbjct 205541 ACATGAGGCTCCACATTTGGTCAGCCTCGACTCGTCGCATGAACAGGTCGGGCACCCACA 205600
Query 213844 GCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTA 213903
| ||| ||||| || | | | | ||| || ||||| ||| || ||| || |
Sbjct 205601 GTGCGTAGAACAAATCGCGAGCTCGCACCTCCTCTTTTCCAGTGTTCTTCTTCAGGTCCA 205660
Query 213904 GAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGG 213958
| || || | | |||||||||||||||||||| |||||| || || ||||| ||
Sbjct 205661 GGAACTCGTAAACGTCCGCGTGCCACGGCTCCAGGTAGATCGCGAACGCGCCTGG 205715
>seq412
Length=567167
Score = 102 bits (112), Expect = 2e-16
Identities = 141/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 48167 ATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATT 48226
|| ||| | ||| |||| |||||||||||||| || | || || |||||||| ||
Sbjct 173426 ATAAGCTCATTGCTGAAGGTGAGACCAGGCATGAGACCACGCTTCTTAAGCCAGAATATG 173485
Query 48227 GCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCT 48286
| ||| || ||| ||||||||||||||||| || || |||||||| | | |||
Sbjct 173486 GACGCAAAGCTGCCCGAGAAGAAGATGCCCTCAACGGCGGCGAACGCCACAACTCGCTCG 173545
Query 48287 CCGAAAGAAGCGTTCTTGTCT-GAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGAT 48345
||||| | || | ||| || | |||||| | ||||||||| |||||| |||| |
Sbjct 173546 CCGAACGTGGCCGT-TTGGCTGGCGATCCACTGCAACGCCCAGTCCGCCTTCCTCTTAAC 173604
Query 48346 GCATGGCATCGTCTC 48360
|| ||||| |||||
Sbjct 173605 ACACGGCATTGTCTC 173619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 930990671198720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |