Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq412 93.3 8e-14 seq293 93.3 8e-14 >seq412 Length=567167 Score = 93.3 bits (102), Expect = 8e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 25819 AAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAG 25878 |||||||||||| ||||| || |||||||| |||||| | || ||||| |||||| Sbjct 173601 AAGAGGAAGGCGGACTGGGCGTTGCAGTGGATCGCCAGCCAAACGGCCACGTTCGGCGAG 173542 Query 25879 CGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATC 25938 || | || || || || || || ||||||||||| ||| || |||||| |||| Sbjct 173541 CGAGTTGTGGCGTTCGCCGCCGTTGAGGGCATCTTCTTCTCGGGCAGCTTTGCGTCCATA 173482 Query 25939 TTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCAT 25994 |||||||| ||| || || |||||| || || ||| ||| ||||| || Sbjct 173481 TTCTGGCTTAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCAGCAATGAGCTTAT 173426 >seq293 Length=664131 Score = 93.3 bits (102), Expect = 8e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 221747 GTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGA 221806 || |||| | ||||||||| || | |||||||||||||| || ||||||| | || Sbjct 203974 GTGTACTCGACGATCTCTGTGCACAAATTGCTGCACTTGATTGTTCCCAGGTTCTGCTGG 204033 Query 221807 TTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTG 221865 || |||||||| || || ||||||||||||||||| |||| ||| ||||| | ||| Sbjct 204034 TTGGACTTGCGGTTAGCGGCGTCCTTGTAGAGCATGTAGGGTGTGCCCGTCTCAATCTG 204092 Score = 87.8 bits (96), Expect = 3e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 221123 ACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATG 221182 || ||||| || || || ||||| | ||| ||| | ||| || ||| | || |||| Sbjct 199781 ACCTGGAATTCGCCAGACAGCACTCGTCTCGAGTAGATGTTGGAGGTGTAGGGCTCGACT 199840 Query 221183 CTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGA 221242 |||||||||||| ||||||||||| ||| |||||| |||||||| |||| ||||| Sbjct 199841 GACTCGTTGTTGCCGAGGATCTGAGCGGTGGAGGCGGTCGGCATGGGAGCCAATAGCAGT 199900 Query 221243 CTGTTGCG 221250 |||||| Sbjct 199901 GAGTTGCG 199908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928304235547520