Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq738 132 2e-26 >seq738 Length=407637 Score = 132 bits (146), Expect = 2e-26 Identities = 327/488 (67%), Gaps = 6/488 (1%) Strand=Plus/Plus Query 24695 GTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGAT 24754 ||||| | ||||||||||||||| |||||| ||||| |||||||| | ||| Sbjct 382845 GTTCTGAAATAATACATTCCAGTCTTCAATCCAGATTTCCATGTATAAAAATGAAGTGAG 382904 Query 24755 GTTAGTTTTGCAAT-GTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAAC 24813 || |||| || ||| | | |||| | ||| | |||| || || | ||| || Sbjct 382905 CATAATTTTTCATGCGTTGGTTTATTC-ATAAATATATTCAATGACTGCGATTGATCAAT 382963 Query 24814 AAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTGT 24873 ||| || |||||| ||| | |||| | || ||| || || || | |||| Sbjct 382964 AAACGGTGCTCTATCAATAGCCATATCAACAAGTGTCTTCTGAGAAATCTCCCATACTGT 383023 Query 24874 TTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTTTC 24933 | | || | | || | | || || || | |||||||||| ||||||||| | Sbjct 383024 TCTATAACATTTCTTCAGATAAGAAGGTATCGATTTTATATTTTGAATTGATCCATTGTT 383083 Query 24934 TCTCAATAGATTCAA-TCTCATATTCGGTGTCCAAAGATTAATTTTT-TCAAGATCTCTA 24991 |||| || ||| |||||| || ||||||| | | |||| |||| | Sbjct 383084 CCTCA-TAATTTCTTGTCTCATTTTATCATTCCAAAGCCCAGCCTGAATCAA-ATCTTTC 383141 Query 24992 ATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTT 25051 || || | ||||||||| || ||| | ||||| ||||| |||| | | | ||| Sbjct 383142 ATTAAATATTTATTTATAATCTGAAACTGACCAGATAAAACCTGTCTTGTATAAATATTT 383201 Query 25052 GAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGC 25111 ||||| | |||||||| |||||| ||| ||||| ||||| ||||| ||||| || ||| Sbjct 383202 GAAGTTATTGGTTCAATTGATTCATAATTGCCTAAAATTTGTGAAGTGGATGCGGTAGGC 383261 Query 25112 ATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAATTTA 25171 ||| ||| |||||||| || |||| | ||||||||| || |||| ||| | ||| Sbjct 383262 ATTTGTGCAATTAATAGAGAGTTTCGAATTCCATATTTACTGATATCTTTTTTCAGATTA 383321 Query 25172 TCCCAATC 25179 |||||||| Sbjct 383322 TCCCAATC 383329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252896418619850