Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq412 86.0 7e-12 >seq412 Length=567167 Score = 86.0 bits (94), Expect = 7e-12 Identities = 143/202 (71%), Gaps = 6/202 (3%) Strand=Plus/Minus Query 65011 CCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACA--CAAAGTCTCGCT 65068 || ||| || ||| ||||||| | ||||| || | ||| | | || |||| | | Sbjct 173610 CCGTGTGTTAAGAGGAAGGCGGACTGGGCGTTGCAGTGGATCGCCAGCCAAA--CGGCCA 173553 Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 | |||| |||||| || | ||||| || || ||||| ||||||||||| || | Sbjct 173552 CGTTCGGCGAGCGAGTTGTGGCGTTCGCCGCCGTTGAGGGCATCTTCTTCTCGGGCAGCT 173493 Query 65129 TCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 | |||| | || | ||| | |||||||| ||||||||||| || || |||| ||| Sbjct 173492 T-TGCGTCCATATTCTGGCTTAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCAGCAAT 173434 Query 65188 GAACTTATTTCCCGAGATGAGG 65209 || |||||||| || ||||||| Sbjct 173433 GAGCTTATTTCGCGCGATGAGG 173412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596222411407040